Miscanthus floridulus: 136549660
Help
Entry
136549660 CDS
T10264
Name
(RefSeq) ABC transporter B family member 28-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
mflo Miscanthus floridulus
Pathway
mflo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136549660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136549660
Transporters [BR:
mflo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
136549660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA_30
Zeta_toxin
AAA_29
AAA_5
RsgA_GTPase
AAA_25
AAA_14
SRP54
AAA_33
AAA_28
Rad17
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
136549660
NCBI-ProteinID:
XP_066397138
LinkDB
All DBs
Position
4:45592054..45613950
Genome browser
AA seq
698 aa
AA seq
DB search
MAISTWSARLLLTPASSRATLCPPRPPAANPLSSSFPRNRLHLARPRAYISAPAPGPEAA
YAPPSLDAAAAAADVAAAISSSDAVTWAGVWALLSRHRARIAVCLAALVACTACTLSMPL
FSGRFFETLIGRGNEPLWRLLSKIAVLYTLEPIFTIIFVINMTIIWEQVMARLRSQIFRR
ILIQKMLFFDRHKVGELTGLLTSDLGSLKSIVSDNISRDRGLRALSEIIGTLCILFTLST
ELAPVLGLLMVSVSVLVAIFKRSTVPTFKSYGILQAHISDCASETFSTIRTVRSFGGEKR
QISLFDNLARAYQISGTKLGVLKSANESLTRVVVYVSLMALYILGGRKVNAGKLSVGTMV
SFIGYTFTLTFAVQGAVNTLSDLRSTLASVERINSVLSVKDIDDSLAYGLAKEIDGKELD
DSNGMYENGSVNKHFMSELKSSSSCSNLAWSGDIHLKEVHFSYPLRSDVEILNGLDLTIE
CGKVTALVGPSGAGKSTVVQLLARYYEPTQGSITVAGEDIRVFDKREWSRVVSLVNQDPV
LFSGSVGENIAYGLPDDVVSKDEIIKAAKAANAHEFIISLPQGYDTLVGERGSLLSGGQR
QRIAIARALLKNAPILILDEATSALDATSERLVQEALNHLMKGRTSLVIAHRLSTVQNAH
RIAVCSEGRITELGTHGELVAKGGSYASLVGTQRLAFE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctccacctggagcgcgcgccttctcctcacccctgcttcctcccgcgccacc
ctatgtccccctcgccctcctgccgcaaaccccctctcgtcgtccttccctcgcaaccgt
ctccacctcgcgcggccgcgcgcctacatctccgcgccggcgccgggccccgaggccgcc
tacgcgccgccctccctcgacgccgcggcggcggcagccgatgtcgccgccgcgatctca
tcctccgacgccgtcacctgggccggcgtctgggcgctgctctcgcgccacagggcccgc
atcgcggtctgcctcgccgcgctcgtcgcctgcaccgcctgcaccctctccatgccgctc
ttctcagggaggttcttcgagaccctgattgggagggggaatgagccactgtggaggctc
ttgtccaagatcgcggtgctgtacacgctggagcccatcttcaccatcatattcgtgatc
aatatgaccatcatctgggagcaggttatggcaaggctgcggagccagatatttcgaagg
attctgatccaaaagatgttatttttcgatcgtcacaaggttggtgagttgactggtttg
ttgacgtctgatttgggctccttgaagagtattgtaagtgataacatatccagagatcgt
ggactgagggcactctctgagatcattggtacactttgtatacttttcacactatcaact
gagctagctccagttcttgggctccttatggtctccgtctccgtgctagttgctattttc
aagaggtcaactgttcccacttttaaatcttatggaatcttgcaagcacacatatcagat
tgtgcatcagagacattttcaactatccgtactgttcggtcgtttggtggtgaaaaacga
caaatttctttgtttgacaatttggcacgtgcttaccaaattagtggcacaaaacttgga
gtgctgaaatctgctaatgaatcattaactcgagtagtcgtctatgtatccctaatggcg
ctttacattcttggtggcagaaaagtcaatgcgggcaaattatctgttgggaccatggtg
tcttttattggttacaccttcacattaacctttgctgttcaaggagctgttaataccctt
agtgatctgcgttccacattggcttccgtagagagaataaattctgttctttcagtgaag
gacattgatgattcacttgcgtatggtttagccaaagaaattgatggcaaagagcttgat
gattccaatggaatgtatgaaaatggctctgttaacaaacatttcatgtcagagctgaaa
tcatccagtagctgtagtaatctagcctggtctggtgacattcatctgaaagaagtccat
ttctcttatccactgagatcggatgtggagattttaaatggccttgaccttacaattgag
tgtggaaaagtcacagcacttgtcgggcctagtggtgctgggaaaagcacagtggtgcaa
cttctagcacggtattatgagccaactcaaggttccatcactgtcgcaggagaagacatc
cgtgtatttgacaaaagagaatggtctcgagtagtatctctagtgaatcaggatccggtc
ctattctccgggtctgttggagaaaatattgcttatggtctcccagatgatgttgtctct
aaggatgagataataaaagctgctaaagctgccaatgctcatgaattcatcatctctctt
ccacaggggtatgacactcttgttggagagcgaggtagtctcctaagtgggggacaaagg
cagaggattgcaattgcacgagccctcttgaaaaatgctcctattctaatacttgatgag
gctactagtgcactggacgcgacaagtgagcggcttgtacaggaagctctcaatcacttg
atgaagggaaggacttctctggtcattgctcacaggctgagtaccgtacagaatgcacat
cgaattgctgtttgctcggagggcaggataactgagctggggacgcacggagaactggtt
gctaagggaggcagttacgcatcacttgtcgggacacagagacttgctttcgagtaa
DBGET
integrated database retrieval system
