KEGG   Miscanthus floridulus: 136550076
Entry
136550076         CDS       T10264                                 
Name
(RefSeq) histone-binding protein MSI1 homolog
  KO
K10752  histone-binding protein RBBP4
Organism
mflo  Miscanthus floridulus
Pathway
mflo03082  ATP-dependent chromatin remodeling
mflo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    136550076
   03083 Polycomb repressive complex
    136550076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mflo03036]
    136550076
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     136550076
  Histone modification proteins
   HAT complexes
    HATB complex
     136550076
   HDAC complexes
    Sin3A-HDAC complex
     136550076
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     136550076
    PRC2.2
     136550076
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     136550076
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    136550076
  Chromatin remodeling factors
   NuRD complex
    136550076
   NuRF complex
    136550076
   NuRF complex (fruit fly)
    136550076
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 CAF1C_H4-bd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD_LRWD1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_EML Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 136550076
NCBI-ProteinID: XP_066397625
LinkDB
Position
4:96349036..96354387
AA seq 405 aa
MDGGSSTLASPQPTAAAAASAAEMEEYRNWKKNAAVLYDLVISHPLEWPSLTVQWLPSEP
SARRHRLVVGTHTSDEAPNNLMVLDAVLPLPPRLAAAAAASGGAVPSPSVSVSRVAPHSG
EVNRARCMPQRPYTVATKTCVDEVHVYHLGDGDGSGKSGADVVLRGHEAEGYGLSWSPMK
EGRLLSGSYDKKICLWDLSSGSGAPVLDAQQVFEAHEDLVEDVAWHLKDENIFGSVGDDC
KLMMWDLRTNKPEQSIAAHQKEVNSLSFNPFNEWILATASGDATIKLFDMRKLSRSLHTF
DSHEAEVFQVEWNPNLATVLASSAADKRVMIWDINRIGDEQSEEDADDGPPELLFVHGGH
TAKISELSWNPSEKWVIASVAEDNILQIWEMAESIYCDDLSMQVN
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggacggcggatcctccacactggcgagcccccaaccgacggcggccgcggccgcgtcc
gcggcagagatggaggagtaccgaaactggaagaagaacgcggcggtgctttacgacctc
gtcatctcccacccgctcgagtggccgtcgctcaccgtgcagtggctcccatcggagccc
tcggcccgcagacaccggctcgtcgtgggcactcacacgtccgacgaggcccccaacaac
ctcatggtcttggacgcggtgctgccgctcccacctcgcctcgctgcagccgccgctgcc
tcgggcggcgccgtcccgtccccgtccgtgtccgtctcccgcgtggcgccacacagtggc
gaggtcaaccgcgcgcgctgcatgccgcagcgtccctatacggtggccaccaaaacgtgc
gtcgacgaggtgcacgtgtaccatctcggcgatggcgacggcagcgggaagagcggcgcc
gatgttgtgctcagggggcatgaggcggagggttatggcttgtcatggagcccgatgaag
gaggggcggctgctgagcggctcgtatgataagaagatttgcctgtgggatctctcctct
gggagtggagctcctgttctggatgcacaacaggtgtttgaggctcatgaggatctcgtt
gaagatgttgcttggcacctgaaggatgaaaatatatttggatctgttggggatgactgc
aagttgatgatgtgggacttgcgtacaaacaaacccgaacaatctattgctgcgcatcaa
aaggaggtcaactctttgtcattcaatccattcaatgaatggatattggctacagcatcc
ggagacgcaactatcaaactatttgacatgcgaaaactatcaagaagcttgcatactttc
gacagtcatgaggcggaggtgtttcaggttgaatggaatccaaatttggctactgtatta
gcttcatctgccgcagacaagagagtgatgatatgggatattaataggattggcgatgag
cagtcagaggaggatgcagacgacggaccaccggagctgctgttcgttcatggaggccac
acagccaagatatcagaactgtcgtggaatcctagcgagaaatgggtcattgccagcgtg
gctgaagataacatcctgcagatctgggagatggcagaaagcatctactgtgatgacctc
tccatgcaggttaactga

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