Miscanthus floridulus: 136550448
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Entry
136550448 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136550448
09122 Translation
03013 Nucleocytoplasmic transport
136550448
03015 mRNA surveillance pathway
136550448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136550448
03041 Spliceosome [BR:
mflo03041
]
136550448
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136550448
Spliceosome [BR:
mflo03041
]
Complex C
Other components
EJC/TREX
136550448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
136550448
NCBI-ProteinID:
XP_066398123
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Position
4:complement(116151204..116156998)
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AA seq
882 aa
AA seq
DB search
MSTYPVLNDRPIDQWTVTELKDELERRYLLVSGLKDDLLKRLFEAMQDEILDGEGKATVV
TSPPEEPDGGETPGSIVASVNQASIEQHVDKGASEVAKQGADLVISVTEAYDESTFATSE
VTQEAVVGTAEASQKSLDAVAEVESSLVDTAATDETNGDGLDSASSGNTIVKEANPHFEG
HDDTIEKTPEDDTNKKMAVDDEPSDLTGSDIKLGLDVHSKILKLEDEPSPPDMKLHSHRE
DSDAVAVAEPEDDTRKKMIIDDVPSGPTHTNVELGAQVDCKIEQEEVSTLFDATALHAYP
KERIVAAAKGLVVGTAEASQRSLDVVAEVESSLVNTAATYETNGNGLDSTSSGNTIVKEA
NPHSEGHGDTIEKTPEDDTNKKMAVDDEPSNLIGGDIKLGLDEHSKILKLEDEPTPSDDM
LRSDNEDSDAVAVAEPEDDTSKKMIIADVPSGPTHTNVELGAKVDCKIEQEEVSILSDAT
ALHAYPKEHIVAVAKGLALPRRTLMSGYTSDIDLDRKEESPDRNSREKLNLDRSSGDESM
DEDVMESKHADSYIKPDDLIGKTEVTSEHVFKEVSLLDTHAEGSSAHSKEVVTEEKPPTP
TEKRKPEDQEVIENIEPIKRQRLWNKDAVNISDQQASKITSTGTQKEVICPAPERSFGRP
NTIARRNSPKERIAPPAKTSATTSLRIDRFVRPFTLKAVQELLGKTGSVCSFWMDQIKTH
CYVTYSSVEEAVATRNAVYNLQWPPNNHNYLIAEFVDPEEVKLKLETPLPSQVPISPSTV
AAPQAATFQQPEANQTLVAPHAPATSRGLLPTPAPFAKLPPTSDPGPARESLPPPPPMKL
EPARTLDELFKKTQAYPRIYYMPLSEEEVSAKRAAHDNGKRG
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatatcctgtattgaacgaccgaccaattgatcagtggacggttacggagttg
aaggatgagcttgagcgaaggtatctgcttgtcagtggtttgaaggatgatcttttgaag
aggctctttgaggccatgcaggatgagatacttgatggtgagggaaaagcaactgttgta
acttcccctcctgaggaacctgatggaggtgaaactcctggttccattgttgcatctgtt
aaccaggcttcaattgagcaacatgttgataaaggtgcttctgaggttgcgaaacagggg
gcagatcttgttatctctgttacagaagcttatgatgaaagtacatttgctacttcagaa
gttactcaggaggctgtggttggtactgcagaagctagtcagaaaagtttggatgctgtt
gcagaagttgagtcttctctagtcgatacagctgcaactgatgaaaccaatggtgatggt
ctagattcagcttcaagtggtaatactatagtgaaggaagcaaatccacactttgaaggt
catgacgatactatcgagaagaccccagaagatgacaccaataagaaaatggctgttgat
gatgaaccttctgatcttactggcagtgacatcaagttgggcctcgatgtgcacagcaag
attctaaaactggaagatgaaccctcacctcctgatatgaaattgcatagtcatcgtgag
gattctgatgccgttgcagttgctgagccagaagatgacacaaggaaaaaaatgatcatt
gatgatgtaccatctggtcctacacatactaatgtggagttaggtgcccaggtagactgc
aaaattgaacaggaagaagtatcaacactgtttgatgctactgcattgcatgcttatcct
aaggaacgtattgtggctgcggcaaaaggccttgtggttggtactgcagaagctagtcag
agaagtttggatgttgttgcagaagttgagtcttctctagtcaatacagctgcaacttat
gaaaccaatggtaatggtctggattcaacttcaagtggtaatactatagtgaaggaagca
aatccacactctgaaggtcatggcgatactattgagaaaaccccggaagatgacaccaat
aagaaaatggctgttgatgatgaaccttctaatcttattggtggtgacatcaagttgggc
ctcgatgagcacagcaagattctaaaactggaagatgaacccacaccttctgatgatatg
ttgcgtagtgataatgaggattctgatgctgttgcggttgctgagccagaagatgacaca
agcaaaaaaatgatcattgctgatgtcccgtctggtcctacccatactaatgttgagtta
ggtgccaaggtagactgcaaaattgaacaggaagaagtatcaatactgtctgatgctact
gcattgcatgcttatcctaaggaacatattgtggctgtggcaaaaggccttgcgctccca
aggaggacgctgatgtcaggctacacaagtgatatagacttggacagaaaagaggagagt
cctgacagaaattctcgtgagaaactgaacttagataggagttcaggtgatgaatcaatg
gatgaggatgtgatggaaagtaagcatgccgattcctatatcaaacctgatgatcttata
ggaaagacagaggttacttcagagcatgtgtttaaagaggtttctctccttgatactcat
gctgagggttcctctgcacactcaaaggaagttgtcactgaagagaagccaccaactcca
actgaaaagaggaagcctgaagatcaagaagtcattgaaaatattgagccaatcaaacgc
cagcgcctatggaacaaggatgctgtcaatatttctgatcaacaagcatccaaaataact
agtactggtactcagaaggaagttatttgtcctgctccggaacgttcttttggcaggccc
aatacaatagcaagaagaaattctccaaaggagcggattgcaccacctgccaaaacatca
gcaacaacttcgttaagaattgatcggtttgtgcgcccatttactctgaaagctgtgcaa
gaacttcttggtaaaactggatctgtctgcagcttttggatggatcaaatcaagacccac
tgctacgtcacatactcttcagtggaggaagctgtggctacgaggaatgctgtctacaac
ctccagtggcccccaaacaaccacaactatttgatcgctgaatttgtcgatccagaagag
gtaaagctcaaacttgaaactcctctgccatctcaagtgccgatcagtccgagcacagtt
gcagcaccgcaggcagcaaccttccaacagccagaggctaaccaaaccctagtagctccc
catgctcctgctacttcaaggggtttgttgcccactccagcaccatttgccaagctgcct
cccacctctgaccctggaccagcaagggagagccttcctccccctcctccaatgaagctg
gaacctgcccggacactggatgaactcttcaagaagacacaggcgtacccaaggatttac
tacatgccactgtcagaagaggaggtatctgctaaacgtgcagctcacgacaatggtaag
aggggatag
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