KEGG   Miscanthus floridulus: 136550448
Entry
136550448         CDS       T10264                                 
Name
(RefSeq) uncharacterized protein
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
mflo  Miscanthus floridulus
Pathway
mflo03013  Nucleocytoplasmic transport
mflo03015  mRNA surveillance pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136550448
  09122 Translation
   03013 Nucleocytoplasmic transport
    136550448
   03015 mRNA surveillance pathway
    136550448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136550448
   03041 Spliceosome [BR:mflo03041]
    136550448
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     136550448
Spliceosome [BR:mflo03041]
 Complex C
  Other components
   EJC/TREX
    136550448
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 136550448
NCBI-ProteinID: XP_066398123
LinkDB
Position
4:complement(116151204..116156998)
AA seq 882 aa
MSTYPVLNDRPIDQWTVTELKDELERRYLLVSGLKDDLLKRLFEAMQDEILDGEGKATVV
TSPPEEPDGGETPGSIVASVNQASIEQHVDKGASEVAKQGADLVISVTEAYDESTFATSE
VTQEAVVGTAEASQKSLDAVAEVESSLVDTAATDETNGDGLDSASSGNTIVKEANPHFEG
HDDTIEKTPEDDTNKKMAVDDEPSDLTGSDIKLGLDVHSKILKLEDEPSPPDMKLHSHRE
DSDAVAVAEPEDDTRKKMIIDDVPSGPTHTNVELGAQVDCKIEQEEVSTLFDATALHAYP
KERIVAAAKGLVVGTAEASQRSLDVVAEVESSLVNTAATYETNGNGLDSTSSGNTIVKEA
NPHSEGHGDTIEKTPEDDTNKKMAVDDEPSNLIGGDIKLGLDEHSKILKLEDEPTPSDDM
LRSDNEDSDAVAVAEPEDDTSKKMIIADVPSGPTHTNVELGAKVDCKIEQEEVSILSDAT
ALHAYPKEHIVAVAKGLALPRRTLMSGYTSDIDLDRKEESPDRNSREKLNLDRSSGDESM
DEDVMESKHADSYIKPDDLIGKTEVTSEHVFKEVSLLDTHAEGSSAHSKEVVTEEKPPTP
TEKRKPEDQEVIENIEPIKRQRLWNKDAVNISDQQASKITSTGTQKEVICPAPERSFGRP
NTIARRNSPKERIAPPAKTSATTSLRIDRFVRPFTLKAVQELLGKTGSVCSFWMDQIKTH
CYVTYSSVEEAVATRNAVYNLQWPPNNHNYLIAEFVDPEEVKLKLETPLPSQVPISPSTV
AAPQAATFQQPEANQTLVAPHAPATSRGLLPTPAPFAKLPPTSDPGPARESLPPPPPMKL
EPARTLDELFKKTQAYPRIYYMPLSEEEVSAKRAAHDNGKRG
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgtcgacatatcctgtattgaacgaccgaccaattgatcagtggacggttacggagttg
aaggatgagcttgagcgaaggtatctgcttgtcagtggtttgaaggatgatcttttgaag
aggctctttgaggccatgcaggatgagatacttgatggtgagggaaaagcaactgttgta
acttcccctcctgaggaacctgatggaggtgaaactcctggttccattgttgcatctgtt
aaccaggcttcaattgagcaacatgttgataaaggtgcttctgaggttgcgaaacagggg
gcagatcttgttatctctgttacagaagcttatgatgaaagtacatttgctacttcagaa
gttactcaggaggctgtggttggtactgcagaagctagtcagaaaagtttggatgctgtt
gcagaagttgagtcttctctagtcgatacagctgcaactgatgaaaccaatggtgatggt
ctagattcagcttcaagtggtaatactatagtgaaggaagcaaatccacactttgaaggt
catgacgatactatcgagaagaccccagaagatgacaccaataagaaaatggctgttgat
gatgaaccttctgatcttactggcagtgacatcaagttgggcctcgatgtgcacagcaag
attctaaaactggaagatgaaccctcacctcctgatatgaaattgcatagtcatcgtgag
gattctgatgccgttgcagttgctgagccagaagatgacacaaggaaaaaaatgatcatt
gatgatgtaccatctggtcctacacatactaatgtggagttaggtgcccaggtagactgc
aaaattgaacaggaagaagtatcaacactgtttgatgctactgcattgcatgcttatcct
aaggaacgtattgtggctgcggcaaaaggccttgtggttggtactgcagaagctagtcag
agaagtttggatgttgttgcagaagttgagtcttctctagtcaatacagctgcaacttat
gaaaccaatggtaatggtctggattcaacttcaagtggtaatactatagtgaaggaagca
aatccacactctgaaggtcatggcgatactattgagaaaaccccggaagatgacaccaat
aagaaaatggctgttgatgatgaaccttctaatcttattggtggtgacatcaagttgggc
ctcgatgagcacagcaagattctaaaactggaagatgaacccacaccttctgatgatatg
ttgcgtagtgataatgaggattctgatgctgttgcggttgctgagccagaagatgacaca
agcaaaaaaatgatcattgctgatgtcccgtctggtcctacccatactaatgttgagtta
ggtgccaaggtagactgcaaaattgaacaggaagaagtatcaatactgtctgatgctact
gcattgcatgcttatcctaaggaacatattgtggctgtggcaaaaggccttgcgctccca
aggaggacgctgatgtcaggctacacaagtgatatagacttggacagaaaagaggagagt
cctgacagaaattctcgtgagaaactgaacttagataggagttcaggtgatgaatcaatg
gatgaggatgtgatggaaagtaagcatgccgattcctatatcaaacctgatgatcttata
ggaaagacagaggttacttcagagcatgtgtttaaagaggtttctctccttgatactcat
gctgagggttcctctgcacactcaaaggaagttgtcactgaagagaagccaccaactcca
actgaaaagaggaagcctgaagatcaagaagtcattgaaaatattgagccaatcaaacgc
cagcgcctatggaacaaggatgctgtcaatatttctgatcaacaagcatccaaaataact
agtactggtactcagaaggaagttatttgtcctgctccggaacgttcttttggcaggccc
aatacaatagcaagaagaaattctccaaaggagcggattgcaccacctgccaaaacatca
gcaacaacttcgttaagaattgatcggtttgtgcgcccatttactctgaaagctgtgcaa
gaacttcttggtaaaactggatctgtctgcagcttttggatggatcaaatcaagacccac
tgctacgtcacatactcttcagtggaggaagctgtggctacgaggaatgctgtctacaac
ctccagtggcccccaaacaaccacaactatttgatcgctgaatttgtcgatccagaagag
gtaaagctcaaacttgaaactcctctgccatctcaagtgccgatcagtccgagcacagtt
gcagcaccgcaggcagcaaccttccaacagccagaggctaaccaaaccctagtagctccc
catgctcctgctacttcaaggggtttgttgcccactccagcaccatttgccaagctgcct
cccacctctgaccctggaccagcaagggagagccttcctccccctcctccaatgaagctg
gaacctgcccggacactggatgaactcttcaagaagacacaggcgtacccaaggatttac
tacatgccactgtcagaagaggaggtatctgctaaacgtgcagctcacgacaatggtaag
aggggatag

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