Miscanthus floridulus: 136551041
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Entry
136551041 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K13114
pinin
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136551041
03015 mRNA surveillance pathway
136551041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136551041
03041 Spliceosome [BR:
mflo03041
]
136551041
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136551041
Spliceosome [BR:
mflo03041
]
Complex C
Other components
EJC/TREX
136551041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
136551041
NCBI-ProteinID:
XP_066398758
LinkDB
All DBs
Position
1:complement(16177934..16181496)
Genome browser
AA seq
411 aa
AA seq
DB search
MAAATEKTAEDIRRELQELQRQHREITERLRDPRGLRRGAPGPGPGPGGPRPLRGFVRPP
VGAESGDQPPQKRRLLSAVVKVDGAENNEEGTKDADAEGHDAPSGVTEGSDRRGFNNGGF
RRDGNLRMQRRVDYNSLPEPAPRELPRNEDPNLVRRNKRMLGQLLVGTLEKFQQEDKKLS
NSEAFLRRSETQRKAEQKVREESERLRQQEREQIAEKRKRDMTLRARVAAKAEEKRLELL
YIQWTEHHKRLSNFLRTKAEPPIYYMPTKPIIDDPAIVEQNKEMAFEEWKSMRRAELTQF
QKQVEEQYLSNVERQLERIQNARNARKANGPANMQEMDKELDTHRAEHGLKTRRVPEEGS
NDDDEDAEDMAAEDELMDEVLGINDGINEDPSKRSEEATTEGGEPALEEAQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgacagagaagacggccgaggacatccgccgcgagctccaggagctccag
cgccagcaccgcgagatcaccgagcgcctgcgcgacccccgtggccttcgccgcggcgcc
cccggccctggtcctggacctgggggcccccgcccgcttcgcggcttcgtgagaccccct
gtgggtgcggaatcgggggaccagcctccgcagaagcgtcggctgctatcggccgtagtt
aaggtggatggcgctgaaaataacgaggaaggcacaaaggatgcggatgcggaggggcat
gatgcgccttcaggtgtcactgaaggcagtgacaggaggggtttcaacaatggcgggttc
agaagggatggtaacctgcggatgcaaaggagggtggactataattcgctgccagagcca
gctccaagggagcttcccaggaatgaggacccgaatttagtgagaaggaataagaggatg
ctggggcagcttcttgtcggtacattggagaaatttcaacaagaggataaaaagttatcc
aactctgaggcttttctgcgcagatcagagactcagcgaaaggctgagcaaaaggttcgt
gaagaaagtgaaaggctgcgacagcaggaacgtgagcaaattgcagagaagcgtaagcgt
gatatgacgcttcgtgcacgtgtagctgctaaggcagaagaaaagaggttggagctgttg
tacattcaatggactgagcatcataaaaggctgtccaatttcttaaggacaaaagctgaa
ccacctatttactacatgccaactaaaccaattattgatgatccagccattgttgagcag
aacaaggaaatggcattcgaagaatggaagtctatgcgcagggctgagctgactcagttc
caaaagcaagttgaggagcaatatctctcaaatgtagagaggcagttggagaggatccag
aatgcccggaatgctcggaaggcgaacgggcctgctaacatgcaagaaatggacaaggag
ctggacacacacagggcagagcatggtctgaagactcggcgagttcctgaggagggcagc
aatgacgatgacgaagatgcagaggatatggctgcggaagacgagctgatggatgaagtt
ctgggcatcaacgatggaatcaatgaggacccatccaagcggtctgaagaagccactact
gaaggcggtgagcctgcactcgaggaagcacaatag
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