Miscanthus floridulus: 136551423
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Entry
136551423 CDS
T10264
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136551423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136551423
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136551423
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136551423
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136551423
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136551423
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136551423
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136551423
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136551423
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136551423
Exosomal proteins of other body fluids (saliva and urine)
136551423
Exosomal proteins of breast cancer cells
136551423
Exosomal proteins of colorectal cancer cells
136551423
Exosomal proteins of bladder cancer cells
136551423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
136551423
NCBI-ProteinID:
XP_066399073
LinkDB
All DBs
Position
4:42959451..42963620
Genome browser
AA seq
585 aa
AA seq
DB search
MYLTAVSVAPAVGFSSSSQQLLPRSARVGRRLVVRADVKVISTGEACRRGLAAGIDKLAD
AVAVTLGPKGRNVVIDQDDVPKVINDGVTIAKSIELPNALEHAGATLLQEIAAKTNSAVG
DGTTTAIVLAREIINLGLLAVATGANPVALRRGIDKAVHELIKILKSKCIPVSTKEDIKA
VASISSGNDEYVGNLIADAMEKIGPDGIIKIESSSSIYTTVEVQEGMKIDKGYVSPYFIT
NQDKAIVEFENARVLLTDQRVNEVQEILPLLEKTTQLSVPLLIIAEDVSHEVYSTLVLNK
LNGLLNVAVVKCPGLGDEKKAILQDIAIMTGADFFASDLGWGLHGITSDQLGMAQKITIT
SESTTIIAHPSMRPEIEARIMQLKKDLEETTSSYLKERFSARIAKLSRGVGVIKVGAATE
AELEDRKLRVEDAKNATFAAISEGITPGGGVTYVHLSKHVPSIMDLVDDAGEKMGVNIVG
KALLVPAMTIARNAGADGPAVVEKLLASEWRVGYNAMTGEFEDLVAAGVVDPCRVARCVL
QNSASIAGLILMTQAMMFDKVKKKKSPIPEIPGIPPLQISQKAKA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgaccgccgtttccgtcgcccccgcagtcggcttctcgtcctcatcccagcag
ctgctgcccaggtcggccagggtcggccgccgcctggtggtgcgggcagacgtcaaggtc
atatcgaccggcgaggcctgccgccgcgggctcgccgccggcatcgacaagctcgccgac
gccgtcgccgtcaccctcggccccaaagggaggaatgttgttattgaccaagatgatgta
cctaaagtaattaatgatggtgtcacaattgccaagtctatagagctcccaaatgcgctt
gagcatgccggtgctacactacttcaagagatagcagccaagacaaatagtgctgttggt
gatggaactacaacggcaattgttttggctcgggaaatcatcaatcttgggttgttggca
gttgccactggtgctaacccagttgcattgagaaggggtatcgacaaagccgttcatgag
ctaattaagattttgaagagtaaatgtatccctgtgagtacaaaggaggacataaaagct
gttgcttcaatatcgtctggcaatgatgaatatgttggcaatctcattgctgatgcaatg
gagaagataggtcctgatggtataatcaaaattgagtcatcatcttcaatatacacgaca
gttgaggtccaggaaggaatgaagatagacaaggggtatgtttctccatacttcatcaca
aatcaagacaaagcaatcgttgaatttgaaaatgctagagtgcttttgactgatcagcgt
gtgaacgaagtccaagagatacttcccttgctggagaagacaacacagttgagtgtccct
ttattaattattgctgaggatgtgtctcatgaggtgtattcaacactggttcttaacaaa
ctgaatggattgctaaatgttgcggtcgttaaatgtcctggtttgggagatgaaaagaag
gctattctccaagatattgctattatgacaggtgcagatttctttgctagtgaccttggc
tggggtcttcatggcattacttcggatcagcttggtatggctcagaaaatcacaataact
agtgaatctacaactatcatagcacatccttcaatgagaccagagatcgaggccagaatc
atgcaactgaaaaaagatctagaggagacaacgagttcctatctaaaagaaaggttctct
gcaagaatcgctaaactttcaagaggtgttggagtcatcaaggttggggcggccactgaa
gctgaactcgaggataggaaactgagagtggaggatgcaaagaacgcaacttttgcagcc
attagtgaaggcataactcctggtggtggagtgacatatgttcatttatcgaagcatgtt
cccagtatcatggacctagtggatgatgcaggagagaagatgggtgtaaatatagttggg
aaggcacttcttgtccctgctatgacgatagctcgcaatgccggggcagatggcccagct
gttgtggagaagcttctcgccagtgagtggcgggttggttacaacgcaatgactggcgag
tttgaagacctcgttgctgctggtgtggtggatccatgcagggtcgcaagatgcgtgctc
cagaactctgcttctatcgcagggctgattcttatgactcaagctatgatgtttgacaag
gtaaagaagaaaaagtcccccatcccggagattcctggtattccgccattgcagataagc
caaaaggctaaggcttga
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