Miscanthus floridulus: 136551779
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Entry
136551779 CDS
T10264
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136551779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136551779
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136551779
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
136551779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
136551779
NCBI-ProteinID:
XP_066399418
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All DBs
Position
4:77529927..77531025
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AA seq
279 aa
AA seq
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MATPAAEKPEDVEIREVWADNLEAEFAVIRDIVDDYPYVAMDTEFPGVVCRPLGTYKTAA
EFNYATLKANVDMLKLIQLGLTFSDEHGGLPALGPEGRPCVWQFNFRGFDPRTDVAASDS
IDLLRRSGIDFSRHAADGADARRFAELLMSSGVVLNSDVHWVTFHSGYDFGYLLKLLTGT
NLPDTMSGFFDLIKIYFPVIYDIKHLMRFCNSLHGGLNKLAELLEVARVGICHQAGSDSL
LTALSFKKLKEAYFNGLTEKYAGVLYGLGFEGGETTSAH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacctgccgcggagaagccggaagatgtagagatccgcgaggtttgggcggac
aacctcgaggcagagttcgccgtgatccgcgacatcgtcgacgactatccctatgtggcc
atggacacggagttccccggcgttgtgtgccgcccgctcggcacttacaagacggcggcc
gagttcaactacgccaccctcaaggcgaacgttgatatgttgaagcttattcagctcggg
ctcaccttctccgacgagcatggtgggctgccggcgctcggcccagagggtcgaccctgc
gtgtggcagttcaactttcgaggctttgaccctcggaccgatgtggctgcatcagactcc
atagatctgctgcgtcgtagtggtattgacttctctcgccatgctgctgatggagctgac
gctcgccggttcgctgagctgctcatgtcctccggtgtagtattgaattcagatgttcac
tgggtgacttttcatagtggctacgactttggctacctgctcaagctactcaccgggaca
aatctgcctgatacaatgtcagggttcttcgatctcatcaagatttactttcctgttatc
tacgacataaaacacttgatgaggttctgcaatagcctccatggaggtctgaacaagctt
gctgagctgcttgaggtcgcaagggttggaatctgccaccaggcagggtctgattcgctt
cttacagcgctgtccttcaagaagcttaaagaggcatacttcaacgggttaactgagaaa
tatgccggtgtgttgtatggacttggctttgagggtggagagaccacctctgctcactga
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