Miscanthus floridulus: 136552145
Help
Entry
136552145 CDS
T10264
Name
(RefSeq) phytochrome a
KO
K12120
phytochrome A
Organism
mflo Miscanthus floridulus
Pathway
mflo04712
Circadian rhythm - plant
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136552145
NCBI-ProteinID:
XP_066399811
LinkDB
All DBs
Position
1:16767150..16774581
Genome browser
AA seq
1130 aa
AA seq
DB search
MSSSRPAHSSSSSSRTRQSSRARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSE
QQGRSGKVIAYLQHIQRGKLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDD
PPKLGIGTNVRSLFTDPGATALQKTLGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLV
VDFEPVKPADFPATAAGALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRV
MAYKFHEDEHGEVFAEITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVK
IIEDEALSIDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQ
QQQKKRLWGLIVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQT
MLSDMLFKEASPLSIVSGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSE
VHGDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKH
DPSDKDDNRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPAQAS
GLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVD
EAIGRHILTLVEDSSVSIVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACAS
RDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEW
NAAMTKLTGWHRDEVIDKMLLGEVFDSSNASCLLKSKDAFVRLCIIINSALAGEEAEKAP
FGFFDRNGKYIECLLSVNRKVNADGVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKA
FSYMRHAINKPLSGMLYSRETLKSTGLNEEQMRQVRVSDSCHRQLNKILADLDQDNITDK
SSCLDLDMAEFVLQDVVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILS
DFLFVSVKFSPVGGSVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDN
KEQSEEGFSLLVSRNLLRLMNGDIRHLREAGMSTFILTAELAAAPSAVGQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcgaggcctgcccactcttccagttcatccagcaggactcgccagagctcc
cgggcaaggatattagcacaaacaacccttgatgctgaactcaatgcagagtatgaagaa
tctggtgattcctttgattactccaagttggttgaagcacagcggagcactccatctgag
cagcaagggcgatcgggaaaggtcatagcctacttgcagcatattcaaagaggaaagctc
atccaaccatttggttgcttgttggcccttgacgagaagagcttcagggtcattgcattc
agtgagaatgcacctgaaatgctcacaacggtcagccatgctgtgccgaacgttgatgat
cccccaaagctaggaattggtaccaatgtgcgctcccttttcactgatcctggtgctaca
gcactgcagaagacactaggatttgctgatgtttctttgctgaatcctatcctagttcaa
tgcaagacctcaggcaagccattctatgccattgttcacagggcaactggttgtctggtg
gtagattttgagcctgtgaagcctgcagattttcctgccactgctgctggggctttgcag
tcttacaagcttgctgccaaggcaatctccaagatccagtcacttccaggtggaagcatg
gaggccttatgcaataccgtggttaaggaagtctttgaccttacaggttatgacagggtt
atggcttacaagttccatgaagatgagcatggggaggtctttgctgagatcaccaaacct
ggtattgagccctatctaggcctgcactatccagccactgatatccctcaagctgccagg
tttctcttcatgaagaacaaagtcagaatgatctgtgattgccgtgccagatccgtgaag
attattgaagatgaggcactctccattgatattagcttgtgtggttcaactcttagagca
ccacatagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatg
gctgttgtggttaatgaaaatgaagaggatgatgaacctgagcccgaacaaccaccacaa
cagcagcagaagaagagactgtggggtctcattgtttgccaccatgagagccccagatat
gtcccgtttccactgcggtatgcctgtgaattcttggcccaagtgtttgctgtccacgta
aacaaggagtttgaattggagaagcagatacgagagaaaagcattctgcgaatgcaaaca
atgctctctgacatgctattcaaggaagcatctcccttgagtatcgtatctgggagtcca
aatatcatggacctagttaagtgtgatggtgctgctcttttgtatggggacaaagtatgg
cggcttcaaacggctccaactgagtctcagatacgtgatattgccttctggctttcagaa
gttcatggggattccactggtttgagtactgatagcctccaggatgctggatatccagga
gctgcttcccttggtgacatgatttgtggaatggcagtggctaagatcacgtccaaggac
attcttttctggttcaggtcacatacagctgctgaaatcaaatggggaggtgcaaagcat
gatccatctgataaggatgacaacagaaggatgcaccctaggttgtcctttaaggctttc
ctcgaggttgtcaagatgaagagtttgccatggagcgactacgagatggatgctattcac
tcattgcaacttattcttagaggtacactgaatgatgccttgaagccggcccaggcatct
ggtttagataaccagattggtgatctcaaacttgatgggcttgctgaattgcaagcagtg
acaagtgaaatggttcgcctcatggaaacagcaactgttccgatattggcagtagatggc
aatggattggtcaatggatggaatcaaaaggtagcagaattgtcagggttgagagttgat
gaagctataggaagacacatacttacacttgtggaggattcttctgtatcaattgttcag
aggatgctatatttagctctgcaaggtagagaagagaaggaagttcgatttgagttgaaa
acacatggctccaagagggatgatggccctgttatcttggttgtaaatgcttgtgccagt
cgtgaccttcatgaccatgttgttggggtttgctttgtagcccaggatatgactgttcat
aagttggtcatggacaaatttactcgggttgagggggactacaaggcaatcattcacaac
ccgaacccactcattcctcctatatttggtgctgaccaatttggatggtgctctgagtgg
aatgcagccatgaccaaacttactgggtggcacagagatgaagtgatcgataagatgctc
cttggcgaggtttttgacagtagcaatgcttcctgccttttgaagagcaaagatgctttt
gtacgtctttgcattatcatcaacagtgcattagccggtgaagaggcagaaaaggctcca
ttcggtttctttgaccgcaatggaaaatatattgaatgccttctgtcagtgaacagaaaa
gtaaatgcagatggtgtcactggagtgttctgtttcattcatgttcctagtgatgacctg
cagcatgcgctacatgtgcagcaagcttctgagcagacagcacaaagaaggttgaaggct
ttctcgtacatgcgacatgccatcaacaaacctctctcaggtatgctttattctagggaa
acactcaagagcacaggtctgaatgaagagcagatgaggcaggtccgtgtctcagatagt
tgtcatcgccagctaaacaagatacttgccgacttagatcaagataacattactgacaag
tcaagttgcttggatttggatatggctgaatttgtgttgcaagatgtggtggtgtctgct
gtaagtcaagtactcataggttgccagggtaaaggtatcagagtcgcttgcaacctacca
gagagattcatgaagcaaaaagtttacggggatggtatccgtctccagcagatcctctcc
gacttcttatttgtttcggtgaagttctctcctgttggtggctctgttgatatctcttcc
aaactgactaagaacagcattggggaaaaccttcatctcatagacttcgaacttaggatc
aagcaccaaggagcaggagtcccagcagaaatattgtcacaaatgtatgaggaggacaat
aaagagcagtcagaggagggcttcagccttcttgtttctagaaaccttctgaggctcatg
aatggtgacattcgtcacctcagggaagctggcatgtcaaccttcatcctcaccgctgaa
cttgctgctgctccttcagcagttggacaatga
DBGET
integrated database retrieval system
