Miscanthus floridulus: 136552156
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Entry
136552156 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136552156
Spliceosome [BR:
mflo03041
]
Common components
Common spliceosomal components
General mRNP proteins
136552156
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Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
DUF8489
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
136552156
NCBI-ProteinID:
XP_066399793
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All DBs
Position
1:complement(191169564..191178527)
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AA seq
538 aa
AA seq
DB search
MDFDEYEYLEKTVEASGAPANGSSGPGSGDKDKERSSRRRSSGGDEERDDVERRSKRSRS
EEGRDRDRERHRDRDRDRHRSSRERRDRDRDGKEKERDREKDKGRRSRDREREKEKERER
EKDRQRRSRSRSERRRDDEERDRYRERDVRRRKEEPEPEVDPERDQRTVFAFQLSLKADE
RDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQVMVK
PSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNINEDQLRQVFEPFGQVELVQLPLDPL
TGLCKGFGFVQFVRLEDAKAAQSLNGQLEIAGRVIKVSAVTDQAGVQVSEATGDLDDDEG
GGLALNASSRALLMQKLDRSGITTSLTGGMGTAGLSTPVVIPTVSVLGAAPATAPLLHPT
VPGLGSIPGATLPITTPSIDLAPPNECLLLKNMFDPALETDPDFDLDIRDDVQEECSKFG
QLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFPS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtatctggagaagacggtggaagcgtccggagcgccggcc
aacgggtcgtcgggccccgggtcgggggataaggacaaggagcgcagctcacgccgccgc
tcatcgggcggtgacgaagagcgtgacgacgtagagcgcagatcgaagcgttctcgctcc
gaggaaggccgcgaccgcgatagggagcggcacagggaccgcgaccgcgaccggcaccgc
agcagtcgggagcggcgggaccgtgaccgtgacggcaaggagaaagagcgggacagggag
aaggacaagggcaggaggagccgcgaccgcgaacgggagaaggagaaggagagggagagg
gagaaggataggcagcggaggagccggagccggtcggagcgacgccgtgatgacgaagag
cgtgatcgctaccgtgaacgcgatgtcagacgtaggaaagaggagcctgaacctgaagtt
gatccagaaagagatcagaggactgtgtttgctttccagttatctttgaaggcagatgaa
agggacgtatatgagtttttttctagggctggaaaggtccgggatgttcgtctcattatg
gatcgaaattcgcgacgttctaaaggtgtcgggtatattgaattctatgatgctatgtct
gttccaatggcgattgctctttctggtcagttgcttcttggtcaacaagtgatggttaag
ccttcagaggctgaaaagaatttagttcagtcaaatgcttcttcaagtggagctgcttca
ggtggagcaaggaagttgtatgttggaaatcttcactcgaacattaatgaggaccagttg
cgacaggtctttgaaccatttggacaagtggagcttgtccaattgccattggatcctctc
actgggctatgcaaaggttttggttttgtgcagtttgtacgtcttgaagatgcaaaagcg
gctcagagtttgaatgggcaacttgagattgctggaagagtaatcaaggtttcagctgtg
acagaccaagcaggcgtgcaagttagtgaagctacaggagatttggatgatgatgaaggt
ggaggcttggcactgaatgccagttccagagctcttctaatgcagaaattggaccgcagt
ggcattacaaccagtttgactggtgggatgggcactgctggtttgagtactccagtggta
ataccaactgtatctgtccttggtgctgctccagctacagctcctcttctgcaccctaca
gtgcctggtcttggttcaattcctggggcaactcttccaattactaccccgtctattgat
ttggctccacctaatgaatgcctattgctcaagaatatgtttgatccagctttggagacg
gatcctgattttgatttggacattagagatgatgttcaggaggaatgttccaagtttggt
caattaaaacatatttttgtagacaaaaatactgccggttttgtgtacctgcggtttgat
agtataacagcagctatgagcgcacagaaagcacttcatggaagatggttcgcagggaag
atgataacagcaacttttatgacccctcaacagtatgaaatgaagtttccgagctag
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