Miscanthus floridulus: 136552324
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Entry
136552324 CDS
T10264
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136552324
03015 mRNA surveillance pathway
136552324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136552324
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136552324
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136552324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
136552324
NCBI-ProteinID:
XP_066399963
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All DBs
Position
1:191567341..191571632
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AA seq
500 aa
AA seq
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MADKAASPEKKSWADVEEEEEAKAKAAAEAEAAAAASSSSTTEPTVEEQAKQIEALSLAP
AVEDAAGEEGPPLLDDSDDSQIQAVTSGGTVYESATTFEDLKLSPELLKGLHDEMGFSRP
SKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPQRKIPQAICICPTRELA
QQNKAVLMRMGKFTGITCACAIPPAQKDYMPISKMAPITDQIVIGTSGTLIKWITHKKLA
TRDIKILVFDEADHMLSEDGFRCDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTKVI
RDGNQIFVKKEELTLEKVKQYKVQVPDESAKIEVIRDKIFEFGQKVGQVIIFVRTKQSTK
NVHNALTRDDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTDVLARGFDQAQVNLVIN
YDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGPTDNVVMKKIEDYFQHSVPE
VRNWQHEEDFESALKDAGLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggcggcgtccccggagaagaagtcgtgggccgacgtcgaggaagaggag
gaggccaaggccaaggcggccgcggaagcggaagcggctgcggcggcgtcctcttcctcc
accactgagccgacggtggaggagcaggccaagcagatcgaggctctctctctcgccccg
gcggtggaggacgccgcaggcgaagagggtccgcccctcctcgatgactccgatgactcg
caaatccaagccgtgacttcgggtggcacggtgtacgagtcggccaccacgttcgaggat
ctgaagctgtctcccgagctgctcaaggggctgcacgacgagatggggttcagccgccca
agcaagatccaggcgatcaccctgcccatgatcctcacgccgccctacaaggacctcgtc
gcgcaggcgcacaacggctctggaaagaccacctgtttcgtcctcggcatgctcagccgc
gtcgacccgcaacgcaagataccccaggctatctgcatttgccccactagggagctcgcg
cagcagaataaggcagttctcatgaggatgggcaagtttactggcattacatgtgcctgt
gcaatcccgccagctcaaaaagactatatgccgatctctaaaatggctccgattactgac
cagattgttattggcacatctggtacgctcatcaaatggattacccataagaagctggcc
acaagggatatcaagatacttgtgtttgatgaggcggatcatatgctttctgaggatggc
tttaggtgtgattctgaaaggatcatgagggatatacaaagaagcgctggtggttgtcag
gtgcttctcttttctgcgaccttcaatgagagggtgaaggattttgttacaaaggtcatt
agggatggaaatcagatattcgtgaagaaggaagagcttactttggaaaaagtaaagcaa
tacaaagttcaagtccctgatgaatcagcaaaaatagaggttataagggacaagatattt
gaatttggacagaaagttggccaggttatcatatttgttagaacaaagcaaagtactaag
aatgttcacaatgctttgacgagggacgactatgtgtgctcctcaattcaaggatccctt
gaccaatcagagagggaaaagataatacaggaattcaaagatggctacaccaaggttctt
atatcaactgatgttcttgctcgaggttttgaccaagcgcaggttaacctggttatcaac
tacgacatgccaatcaaatttggtacaagagatgaacctgattatgaggtgtacttgcac
agaattggcagagctgggcgctttggccggaaaggtgctgtgttcaacttgttgtgtggt
ccaacagataatgttgtgatgaagaagatcgaggactatttccagcacagtgtacctgag
gttcggaattggcaacatgaagaagattttgagtctgctcttaaggatgcaggtttactt
taa
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