Miscanthus floridulus: 136552357
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Entry
136552357 CDS
T10264
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136552357
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
136552357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Aq_aa27
AAA_22
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
136552357
NCBI-ProteinID:
XP_066399997
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All DBs
Position
4:101952226..101966087
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AA seq
804 aa
AA seq
DB search
MEGNVAGADGGGGGGGVERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYHN
TKTLLHFYDPMVVIVPPNKTAADGMVGVSELIDKHYPANKKVTMARGCFDDTKGAVIVKS
LSARDPSALGLDTYCKQYYLCLAAATATIKWIESEKGVFITNHSLSVTFNGSFDHMSIDS
TSVQTLEIIDPLHTELWGTSNKKKSLFQMLKTTKTTGGARLLRANLLQPLKDIQTINARL
GCLDELMSNEELFFGLTQGLRKFPKQSDKVLCHFCFKPKKIRDEVLKPANGRKSQMLISD
IIVLKTALDAIPFLSKVLKGAKSVLLHNIYQTVCENPKYANMRKRIGDVIDEDVVHSRAP
FVACTQECFAIQAGIDGLLDVARRSFCDTSEAIHNLAKKYREEYNMPNLKMPYNIRRGFY
FIIPQKDITDRLPNKFIQVVRHGKNIHCSSLELASLNVRNKSAAAECFSRTELCLEGLID
EIRGDIGILTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDDGPMAINAGRHPILE
TLRTDFVPNDIFLSEASNMVLVMGPNMSGKSTYLQQICLIVILAQIGCYVPAQFASLRVV
DRIFTRIGNGDNVENNSSTFMTEMKETAFIMQNVTSRSLVVVDELGRATSSSDGLAIAWS
CCEYLLSVKAYTVFATHMERLSELATMYPNVKILHFEVDLRNDRLDFKFRLKDGVRRVPH
YGLLLAKVAGIPTSVIDTSTSITSQITEQEMTRMDANCEEYGSLQMTYQVVQRLICLKNS
NHGEDNIREALQNLKESYAAGRLT
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaacgtcgccggagctgacggaggaggaggaggaggaggcgtagagcggtct
agcttcgtgatcggactcatcgagaaccgcgccaaggaggttggtgttgcagcctttgat
ttaagatcagcctcattgcacctatctcagtatatcgagacaagttgctcataccacaat
acaaagacactacttcatttctatgatcccatggttgtcattgtgcctccaaacaaaaca
gcagcagatggtatggttggagtttcagaactgatcgataaacattacccagcaaacaaa
aaggttactatggcacgtggttgctttgatgacacaaaaggtgctgtcattgtgaaaagt
ctttcagctagagacccatctgcgcttggtttagatacttactgcaagcagtattatctt
tgtcttgcggctgccactgcaacaattaaatggatagaatcagaaaagggcgtgttcatt
accaatcactcattatcagttacattcaatgggtcatttgaccatatgagtatcgactca
actagtgttcaaacattggaaattattgatcctctccatactgaactatggggcactagc
aacaaaaagaaaagcctctttcagatgctgaagactacaaagactacaggaggggctaga
ttgctgagagctaacttattacaaccattaaaagatattcagaccatcaatgctcgtcta
ggctgcttggatgagcttatgagcaatgaggagctgttttttggtttgactcaaggtcta
cggaaatttccaaaacaatcagataaggttctctgtcatttctgcttcaagcccaaaaag
attagagatgaggtattgaagcctgccaatggtagaaagagccagatgttgatttctgat
attattgttcttaaaactgctctggacgccataccattcttatccaaggttttgaagggg
gcaaaaagtgttcttcttcacaacatttatcagactgtgtgtgaaaaccccaagtatgcg
aatatgagaaagagaattggagatgtcattgacgaggatgtggttcattcaagggctcca
tttgtagcctgcactcaggaatgttttgctattcaggcaggaattgatgggctgcttgat
gttgctcgtcgatctttctgtgataccagtgaagccatacataacctcgccaaaaagtac
agggaagaatataatatgccaaatttgaagatgccctataatattaggcgaggattttac
tttattataccccaaaaggacatcaccgataggcttcctaataaatttatccaggttgtt
agacatgggaagaatatccattgctcaagtttggagcttgcttcactgaatgttaggaac
aagtcggctgctgctgagtgcttctcgcgcacggaactttgtttggaagggcttattgac
gaaatcagaggagacattggtatcctaacattgctcgccgaagtattatgtcttttggac
atgattgtaaattcttttgcgcatacaatatctacaaagcccgttgatcgctacacaaga
ccagagttcacagatgatggtccaatggcaatcaatgccggacgacatcctattcttgag
accttgcgtactgattttgttcctaacgatatctttctctctgaagcatctaatatggtt
cttgtcatggggccaaatatgagcgggaaaagcacatatctccaacagatatgtttaatt
gtcattcttgcacaaattggctgttatgttccagctcagtttgcatccttaagagttgtt
gatcgtatattcacacggattggtaacggggacaatgttgaaaacaactcgagtacgttt
atgacagaaatgaaagaaactgctttcatcatgcaaaatgttacttcaaggagcttggtt
gttgtggatgagcttggaagagcaacatcttcctcagatgggttggcaatcgcatggagc
tgctgtgaataccttctttctgtgaaagcatacactgtttttgccacgcacatggaacgc
ttgtcagaacttgcaacaatgtatccaaatgtgaagatcctccattttgaagttgactta
agaaatgaccgcttggatttcaagttccgcctaaaggatggcgtccgacgggtaccgcac
tatgggcttcttctggccaaagtagctggtatccctacttcggtgatcgacacctcaaca
agtatcacttcacagatcacggagcaggaaatgacaaggatggatgccaactgcgaggag
tacgggtcgcttcagatgacgtaccaggttgtgcagcggcttatctgcctgaagaactca
aaccatggcgaagacaacatccgtgaagcactgcagaatctcaaggagagctatgctgcg
ggccggctaacataa
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