Miscanthus floridulus: 136552428
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Entry
136552428 CDS
T10264
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136552428
Enzymes [BR:
mflo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
136552428
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
136552428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
TRM5-TYW2_MTfase
Beta-prop_ATRN-LZTR1
Beta-prop_TYW4
Kelch_1
Kelch_HCF
Kelch_2
Kelch_FKB95
TYW2_N_2
Beta-prop_Calicin
NANM
DUF6242_C
MTS
DNA_methylase
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
136552428
NCBI-ProteinID:
XP_066400089
LinkDB
All DBs
Position
4:104430675..104437645
Genome browser
AA seq
1080 aa
AA seq
DB search
MDFGRRKVAALAALSSPTPDKSPKGGVDAPIAPLLEALNSHPDLFTTSSCSGRVSVLAQP
PPPHEGQGDGAPKPKKKARGGGWVYVSHDPADPDAVVEQLFGGSGSGGAGDELVFRFEPM
IVAVECRDAAAAAELVAAAIGAGFRESGITSLQKRAMVAIRCSIRMEVPLGQINELVVSP
EYVRYLVRIANSKMEANKRRMDGFLDLLQTKGLSYSSGLSNNCNGSGGQSVDYEASVGPE
AKIPLDKCAKTNDEHLVTKRRNSGRSCDDDTGSIEAQYFGNQDSAWSEGVKHGFGNAKRL
LMQEKLSENKNHLPTTTLEISGEPIEKLFLWGQASCVFTVGEEQQVLTFGGFGGPGRHAR
RNYSLLLNHKSGLLTEMIFKAFPSPRMGHTVTAVGSSTYLIGGRGAPSEILDDVWVLLST
GNTWSKVECCGDLFQPRHRHASAAVASKIYVFGGLSNEGIYSCMNVLDTKNMQWSVLAAS
GEWPCARHSHSMVSYGTNLFMFGGHDGQRALKDFYSFDTTTLKWNKENSNGGSPSPRFSH
CMFIYKNYLGILGGCPITENNQEVTLLNLKHRVWFCVSVPLLSQSLCVRSSSVVIKDDLV
ILGGGASCYAFGTKFSQPIVLDLHSVESMFKYDRNKDDTVQSHDAISAVDLPKDEQNGIF
DHDTKSEDACSGGLTDSSPLVLQVEKTYAKLAKDILKKFAWLDLSRKVRVSHDNGHVLFP
INEAFRVLNAEEHIKMTHDDSCTFGESLVFTEKKLVGENLSLQDALKILSSCNGSFMKDE
LAISRKPSKSPQTIMKELVSSLLESKGMPPQLLEQLPARWETLGDILILPKTCFKNPLWE
SVSEELWPLVAKSLGAQRLARQGKIMPNGTRDSTLELLLGDNGWVTNYENGICCSLDATK
CMFSSGNHSEKLRMGQLNCRDEVVVDLFAGIGYFVLPFLVKANAKLVYACEWNPHALEAL
RRNVSDNSVEDRCIILEGDNRVTAPKGVADRVCLGLLPSSECSWATAVETLRVGGGVLHI
HRNVNDSDETRWLDNVVESISNIAKNHGLCWNVSVEHVERVKWYGPHIRHLVVDVRCRQI
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggtcgccggaaggtggcggcgctggctgcgctctcctcgccgacgccggac
aagtccccgaagggcggcgtcgacgcccccatcgccccgctcctcgaagccctcaactcc
cacccggacctcttcaccacctcctcctgctccggtcgcgtctccgtcctcgcgcagcct
ccgccgccgcatgagggccagggcgatggcgcccccaagccgaagaagaaggcgcggggc
ggcgggtgggtatacgtatcgcacgaccctgccgatccggacgccgtggtggagcagctg
tttggcgggagcgggtcgggaggggcgggggacgagctggtgtttaggttcgagccgatg
atcgtggcggtggagtgcagggacgccgccgcagctgcggagctcgtcgcggccgcgatt
ggtgcggggttccgggaatcaggtatcacaagcttgcagaaacgtgcaatggtagcaata
agatgctcaattcgcatggaagtaccactggggcagattaacgaacttgttgtttctccg
gagtatgtccgataccttgttagaattgccaacagtaaaatggaggcaaataaaaggcga
atggatggatttctggatctcttgcagactaagggtttgtcatactcatcggggttgtca
aacaactgtaatggaagtggtggtcagtctgttgattatgaggcttccgtgggtcctgaa
gctaagataccattagataaatgtgccaaaacaaatgatgagcacttagttacaaaaagg
agaaacagtggacgtagttgtgatgatgatacaggttcaatagaagcacagtattttgga
aatcaagactctgcatggagcgagggtgtcaagcatggttttggtaatgctaaacgatta
ttaatgcaggagaagttgtcagaaaacaaaaatcatctccctaccacaacattggagatt
agcggtgaaccaattgagaagctcttcttatggggccaagcctcttgtgtgtttactgtt
ggagaagagcagcaggtcctaacttttggtggttttggaggaccaggaagacatgcaagg
agaaactattcccttctgctcaatcacaaatctggtttgttgacagaaatgatcttcaaa
gcatttccttcaccacggatggggcatacagttactgcagttggtagtagcacttatcta
attggaggtagaggtgccccttcagaaattcttgatgatgtctgggttttgctaagcact
gggaatacgtggtcaaaagtggagtgctgtggagatctgttccaaccaaggcaccgacat
gcatctgctgcagtagcttcaaaaatttatgtatttggcggactcagtaatgaaggaata
tattcttgtatgaatgtattggacacaaaaaatatgcaatggagtgtacttgctgcttca
ggcgaatggccatgtgctcgacattcacattctatggtgtcgtatggtactaatctattc
atgttcggaggtcatgatggccaacgggcactgaaggacttctacagttttgatacaaca
acacttaagtggaacaaggaaaactcaaatgggggatctccgtcacctaggttttcacac
tgcatgttcatctacaaaaattatcttgggatacttggtggctgccctattaccgaaaac
aaccaagaagttacattgctgaacttaaagcatcgagtctggttttgtgtttccgttcca
ttgctgagccagtccctctgtgtccgtagttcatcggttgtaattaaagatgatcttgtt
attttaggtggtggtgcatcttgttatgcatttggaaccaaattcagtcaaccaatagtt
cttgatctgcattcagtggagtctatgtttaaatatgataggaacaaagatgacacagtt
caaagtcatgatgcaatatctgctgttgacttgccaaaagatgagcaaaatggcatcttt
gatcatgatacaaaatcagaagatgcttgttctggtggtttgacagattcaagccctttg
gttcttcaagtggaaaagacatatgccaaattagcaaaggacattctgaaaaagtttgca
tggttggatctttctagaaaagttcgagtcagccatgataatggccatgttctttttcct
attaatgaagctttccgtgtcctaaatgctgaagagcatatcaagatgacacatgatgat
tcatgtacctttggggaatcattagtgtttactgaaaagaaacttgtaggagagaaccta
tctcttcaggatgcattaaaaattttgtcatcttgcaatggttcctttatgaaagatgaa
ctggccatcagccgaaagccttccaagtctcctcaaaccatcatgaaagaacttgtatct
tctctactggaaagtaaagggatgccccctcagttgttggagcagcttccagctaggtgg
gagacacttggtgatatcctcatacttccgaagacatgttttaagaatccgttgtgggaa
tcagttagcgaggaactttggccactagttgccaagtcacttggtgcacaacgtcttgca
cgccaaggtaaaatcatgccaaatggtacaagagatagtacactggaacttcttctgggt
gataatggatgggttaccaattatgaaaatggcatctgctgttcacttgatgcaacaaaa
tgcatgttttcttctggtaatcattcagagaaacttcgcatgggacagctaaactgcaga
gatgaggtcgtcgtggatttgtttgctggaattggatactttgttcttccgtttcttgtg
aaggctaatgccaagctagtttatgcatgtgaatggaatccacatgctctggaggctctt
cggcgcaatgttagtgacaacagtgtggaggatcgatgtattatacttgaaggagataac
cgggtgactgcacccaaaggtgttgctgatcgagtctgtcttggattgttaccctcaagt
gaatgtagctgggccactgctgttgaaactttaagggttggcggtggtgtattgcatata
cacaggaatgtcaatgactctgatgagacacgctggttggacaatgttgttgaatccatc
agtaatatcgccaaaaaccatggactatgttggaacgtgtcagtggagcatgttgaacgt
gtcaaatggtatggaccgcatattcgccaccttgtagttgatgttagatgccggcaaatc
taa
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