Miscanthus floridulus: 136552652
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Entry
136552652 CDS
T10264
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136552652
03015 mRNA surveillance pathway
136552652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136552652
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136552652
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136552652
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
136552652
NCBI-ProteinID:
XP_066400309
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All DBs
Position
1:complement(193498050..193505462)
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AA seq
386 aa
AA seq
DB search
MGFSRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPQRKIPQAICIC
PTRELAQQNKAVLMRMGKFTGITCACAIPPAQKDYMPISKMAPITDQIVIGTSGTLIKWI
THKKLATRDIKILVFDEADHMLSEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKD
FVTKVIRDGNQIFVKKEELTLEKVKQYKVQVPDESAKIEVIRDKIFEFGQKVGQVIIFVR
TKQSTKNVHNALTRDDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTDVLARGFDQAQ
VNLVINYDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGPTDNVVMKKIEDYF
QHSVPEVRNWQHEEDFEAALKDAGLL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggggttcagccgcccaagcaagatccaggcgatcaccctgcccatgatcctcacgccg
ccctacaaggacctcgtcgcgcaggcgcacaacggctctggaaagaccacctgtttcgtc
ctcggcatgctcagccgcgtcgacccgcaacgcaagataccccaggctatctgcatttgc
cccactagggagctcgcgcagcagaataaggcagttctcatgaggatgggcaagtttact
ggcattacatgtgcctgtgcaatcccgccagctcaaaaagactatatgccgatctctaaa
atggctccgattactgaccagattgttattggcacatctggtacgctcatcaaatggatt
acccataagaagctggccacaagggatatcaagatacttgtgtttgatgaggcggatcat
atgctttctgaggatggctttaggagtgattctgaaaggatcatgagggatatacaaaga
agcgctggtggttgtcaggtgcttctcttttctgcgaccttcaatgagagggtgaaggat
tttgttacaaaggtcattagggatggaaatcagatattcgtgaagaaggaagagcttact
ttggaaaaagtaaagcaatacaaagttcaagtccctgatgaatcagcaaaaatagaggtt
ataagggacaagatatttgaatttggacagaaagttggccaggttatcatatttgttaga
acaaagcaaagtactaagaatgttcacaatgctttgacgagggacgactatgtgtgctcc
tcaattcaaggatcccttgaccaatcagagagggaaaagataatacaggaattcaaagat
ggctacaccaaggttcttatatcaactgatgttcttgctcgaggttttgaccaagcacag
gttaacctggttatcaactacgacatgccaatcaaatttggtacaagagatgaacctgat
tatgaggtgtacttgcacagaattggcagagctgggcgctttggccggaaaggtgctgtg
ttcaacttgttgtgtggtccaacagataatgttgtgatgaagaagatcgaggactatttc
cagcacagtgtacctgaggttcggaattggcaacatgaagaagattttgaggctgctctt
aaggatgcaggtttactctaa
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