Miscanthus floridulus: 136552950
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Entry
136552950 CDS
T10264
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136552950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136552950
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
136552950
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
136552950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
136552950
NCBI-ProteinID:
XP_066400622
LinkDB
All DBs
Position
4:complement(122423673..122428873)
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AA seq
552 aa
AA seq
DB search
MSMAYMAAVAPVPWWPPPPELAPVGFLDTSSAAGYPEPQTLPFFLAPTPPPPPPLPAVYP
LLPPSAPIVIQLQPDPSFLADVDQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIV
MHWADAVAYEQSVPQGLATATILTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLR
QILEGRSEVSELQTVEKAKVPLMRFRFTGIAVDFTYAQLPVIDALKAINTFSPQLLQKID
TRSWRSLSGVRVNEQIVQLVPNAEKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAA
YVCRKFPDASVNGLFAVFFQTFAHWPWQVPVSLHDEPTTCLHSEGRLMPIVMPCTPPEFC
VSNVTKGSFKKIREELTRGYALTRDPLRHDFQWTWLFEPFPYDQKYQQFLRIALCAPTFA
ELRDWAGWVKSRFRILILKLERAGIECDPCPSEEVDHTDSDPNVVFYWGLIPERIIQVDT
SSLKEDFMEDITNDVYGTVKCTHSDVTISVVGLPQLPKSMCSQSVHWQYMQHCMMGYEGT
DEGQSAGWLGLG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggcgtacatggcagctgtcgcgcccgtcccctggtggccgcctcccccggag
ctggcgcctgtgggcttcctcgacacgtcctctgccgccggctatccagagccccaaacc
ctacccttctttctagcgccgacccctccgccgccgccgccgctgcctgcggtgtaccct
cttcttcctccctcagccccgatcgtcatccagctccagcccgaccccagcttcctcgca
gacgtggatcagcgccgcagcagttccctcgttcagttcttgaaggatgagggggccgtt
ccgtcgccggaggatgaaaagaagagggagaaggtgatccgagagctcaagaagatagtg
atgcattgggccgacgcggtggcctatgagcagagtgtgccccaggggctggccacggct
acgatcttgacatacggttcttacacattaggggctcatggacctgaatctgacattgat
gtactttgcgttggaccttgtattgcaacactgcagtaccatttctttgttgttttgaga
caaattcttgagggcagatcagaagtatcagaactgcaaactgttgagaaggctaaggtt
cccttgatgcgatttagattcactgggattgcagttgatttcacatatgcccagctccct
gttattgatgcactaaaggctataaatacatttagccctcaactactacagaaaattgac
acacggagctggaggagtttatctggagttcgtgtcaatgaacaaattgttcagctagta
ccaaatgcagagaagtttcaagctctgttgcgatgcatcaaactatgggctaggaaaaga
ggacttcattgtcattatcttggcttctttgctgggattcatttagcgatccttgcggct
tatgtctgtcggaaatttccggatgccagtgtcaatggtttgttcgcagtgttctttcag
acttttgctcactggccttggcaagttccagtaagtctacatgatgagccaactacctgc
ttgcattcagaggggcgtctcatgcccatagtgatgccttgtaccccgccagagttttgt
gtgtccaatgtgacaaaaggcagcttcaaaaaaataagagaggaacttacacgtggttat
gctttgacaagggatccattgaggcatgatttccagtggacctggctttttgaacccttt
ccatatgatcagaaatatcaacagtttcttcgcattgctttatgtgcgccaacttttgct
gagctacgagactgggctggatgggtgaaatctcgattccgtatcctgattctgaagctg
gaaagggctgggattgagtgtgatccatgcccctcggaggaagttgatcatacagacagt
gacccgaacgtggtcttctactggggcctcatccctgaaagaatcattcaggttgacact
agctccctgaaagaagatttcatggaagacatcaccaatgatgtgtatggcacggtgaag
tgcacgcattcagatgtgacaatatctgtggttgggctgccacagctgccaaagagtatg
tgcagccagtctgttcactggcagtacatgcagcattgtatgatggggtacgagggcaca
gatgaaggccagagcgcaggttggctaggacttggttag
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