Miscanthus floridulus: 136552967
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Entry
136552967 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136552967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136552967
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136552967
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136552967
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
136552967
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
136552967
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
136552967
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
136552967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
136552967
NCBI-ProteinID:
XP_066400645
LinkDB
All DBs
Position
4:123018221..123024133
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AA seq
857 aa
AA seq
DB search
MAGVPPPPRQLEVRRFAAARAGELRSLYAAVSSRLDDAGGRQQPRSARRRTTGHLPNKRR
RRGAGEVGTGDDGGLPARKQSRRVRRRLELAGNPAEGFSVAGDGARRLRTHLWYAKRFSM
ERRWGFILPVGAQGRGRGSRSVLKRLKNGTTVHDAGYFIPIELDGPEDALLSILRMVLRP
SPAEKTPDLKHLQDQVMRGVCYENAMLWDVRSMHSQIVGPVTYMWRPFSRADDKSEIEGD
PCSSHSIHDESGNSSRRQLWIWIHPAALDEGISVIRFACERQVFQDSAGVVKCCSLEGKI
ARLEVNGCKAMQSLKKILHPTNSSNINMVSDTSDISASTDTPLDSLTCPSFRKHPVIDNA
DILQPGAILSMVVHDPREVSVNGTDSSKLASLDKQSKVLEEDVAPNANEASSEVANMLPL
MWMHPGKHDIFLSDCRELWDSRQSINPPVSDEVLCKEKHCERMKFFYLDSGNDQGRTTQE
KDNFIRSCPVILLKHAREGMPALGWSIILPLSWVKPFWLFLVSHGAHAIGLRERRWIAAK
FRMPCFPYDYPDSKAYASYASKEAAGFDKVAERCPVAKRPPSVPVPPLWHCIMTCFHKDD
DILGVLEVDDLVRANMTLPKNSSVHSKSGDAEPSQANVASLQLHVPRTTQMLRQYVEDFD
LKYLSSSSDMKVDSDQPNLASNDTVKMARFTSELCLTRVLIRAFKVGSFEEGAVVCAPFP
SDLSAWKIRSKEEEEEECIEKWELQLPQSHVSSYFAWFDPSASSLKLPTDDTAREAFRWP
IGFVTSGFIHGSNGQDAVAVAFCEAKLLAVLRRQQWAHENLQSREICVLVRNARSAAYRR
ALATIVLEHQESDLEFL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtgccgccgccgccgcggcagctcgaggtgcggcgcttcgcggccgcccgc
gccggcgagctccgctccctctacgcagccgtctcgtcccgactcgacgacgccggcggc
cggcaacagccccgttccgcgcgccgccgcaccacagggcacctccccaacaagcgccgc
cgccgcggagccggagaggttggcaccggggacgacgggggcctcccggcgcggaaacag
tcgaggagggtgaggcggcggctggagctcgccggcaaccccgcggaggggttctcggtc
gccggcgacggtgcgcggcggctgcgcacgcacctgtggtatgcgaaaaggttctccatg
gagaggcggtggggattcatcttgcccgtcggtgcccaggggagggggaggggctcaagg
agtgttctcaaacgtctgaaaaatggcacgactgtccatgatgctggctacttcattcca
attgagctagatggtccagaggacgccctgttatccattctcagaatggttctgcgcccg
tctcctgcagaaaaaacacctgatttgaagcatctacaagatcaagttatgcgaggtgtt
tgctatgagaatgctatgctttgggatgttaggagtatgcattctcaaattgttggacca
gtaacgtatatgtggcgtccattctcaagagcagatgacaaatctgagattgaaggagat
ccatgctcttctcacagcattcacgacgaaagcggcaattcctcacgacgccagttgtgg
atatggattcatcccgctgcactcgatgaagggattagtgtgataagatttgcatgtgag
agacaggtattccaagattccgctggtgttgtcaaatgttgctcattagagggaaaaatt
gcaagattggaagtcaatggatgcaaggctatgcaatctcttaagaagattttgcatcca
accaattcaagtaatatcaatatggtatcagatacaagtgatatctctgcatcaactgat
actcccctagattcccttacctgtccctcatttcgaaagcatcctgtcattgataatgct
gacattcttcagcctggtgctatactatccatggtagttcatgaccccagagaagtttca
gtcaacggaacagattcttctaaattagcctcccttgacaagcagagcaaagttttggag
gaagatgtagccccaaatgctaatgaggcgtcatcagaggttgcaaatatgttgccattg
atgtggatgcaccctgggaagcatgatatattcctttctgactgtagggaactgtgggac
tccaggcaaagcataaatcctcctgtgtcagatgaggttctttgtaaggagaagcactgt
gaacgtatgaagtttttctacttggattcaggaaatgatcaagggcgaacaacccaagag
aaggataacttcattcgatcctgcccggttattcttttgaaacatgccagagagggaatg
cctgctctagggtggtccatcattctacctttgagttgggtgaaacctttctggctcttt
ctagtatctcatggtgcccatgcaattggcttaagagagagacggtggattgcagcaaag
ttcagaatgccatgctttccttatgattatccagacagcaaagcatatgcatcatatgca
tccaaagaagctgctggttttgataaagtagctgagcgctgccctgttgccaagagacct
ccaagcgttcctgtgcctcctttatggcactgtatcatgacttgttttcataaagatgat
gacatattgggtgttcttgaagtagacgacttagtgcgggctaatatgacattacctaaa
aactcgtctgtacattccaaatctggagatgcagaaccatcgcaagcaaatgttgcatcc
ttgcaacttcatgtgccaagaaccacccaaatgttgagacaatatgtggaagattttgat
ttgaaatatctgagttcatcatctgacatgaaagtggattctgatcaacccaacttagct
tctaatgacactgtcaaaatggcacgattcacgagtgaattatgccttacaagggttctg
atccgagctttcaaggtaggttctttcgaagagggtgctgtcgtttgtgccccatttcct
tcagatctttcagcttggaaaatcagatcaaaggaagaagaagaggaagaatgcatagaa
aaatgggaactccagcttcctcagtcccatgttagttcctatttcgcctggtttgatcct
agtgccagcagccttaagttgcctacagatgacaccgcacgggaagctttcaggtggccg
ataggctttgtgaccagcggtttcatccatggaagtaacgggcaagacgcagttgcggtc
gcattctgcgaggcaaagcttctggcagtattgaggcgacagcaatgggcccatgaaaac
ttgcagagccgggagatctgcgtccttgtcaggaacgcaagatcggctgcataccgacga
gcgctggccacgatcgtcctggagcatcaggaatcagacctggagtttctgtag
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