Miscanthus floridulus: 136553133
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Entry
136553133 CDS
T10264
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136553133
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136553133
Factors involved in mRNA localization
Other mRNA localization factors
136553133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
136553133
NCBI-ProteinID:
XP_066400681
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All DBs
Position
1:complement(195296685..195318312)
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AA seq
1285 aa
AA seq
DB search
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYSDVAAYRLSLGEDTKA
INQLNTLIQEGKEMASLLYTYRSCVKALPQLPDSMKHNQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLVNGPTITHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSTQWQDTDTMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKESESLYKRVKINRLLNVFKNDPVI
PAFPDLHLSPAAILKELSSYFQKISSQTRLLALQAPHEIQGRELQDYQRHYLILNHMGTM
RAEHDDFSIRFASAMDQMIRLKSSDGVDNDWSRDIKGNMYDIVVEGFQLLSRWTGRIWEQ
CAWKFSRPIPDSQQNPTTCFDYEKVVRYNYTAEERRALLELIGYIKSVGLMMQHCDTLVS
EALWETIHMEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMANTSKADPEQHS
LHQETEEMRQNTFYPRPVAPTAAQIHCLQFLICELVSGGNLRKPGGLFGNSGSGIPVEDL
KQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDH
VIESQDAGLLESILIPFDLYNDSAQHALTSLKQRFLYDEIEAEVDLCFDLLAQKLNEIIF
TYYKSCAASTLLDSSFTYACDDGEKYFVKPLRFDAIFKLRRVMVLGRTIDLRSIITQRMN
KIFRENIDFLLERFENGDLCGVVELQQLLDILELTHQSISRFLELDSYSLMLSEMQENLS
LVSYSSRISSQIWSEMQTDFLPNFILCNTTQRFVRSIKGTHHSLHRSSASTGKPYFYCGS
HDLTMAYQGLAGLYRDFFGVPHMFAVVKLLGSRSLPAIIRALLDHISSKITGLVPKINAL
QEALPKSIGLLSFDGGIAGCQKIVHEILTWEAKSEVKTEVLHDLKEIGSALYWMSILDIV
LRQIDTTQFMQSAPWLGLVPGNDGQVKHAYSDNTPFTTLLSAATNAVTSSPACPNPSTFL
VMSKQAEAASLLYKSNLNSGSVLEYALAFTSAALDRHYSKWSATPKTGFIDITTSKDFYR
IFSGLQYSYLEDSINNPSKKQEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFLNVAEV
ESATVSNYQSSERTKSSNFLQGYEGILEAMRKARRLNNHVFSMLRARCPLEDKVACAIKP
SGAPVHRMKFMNTVSAFETLPQRDT
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggccatccccgtcgaagaggccatcgccgccctctccaccttctcgctcgaggatgag
caaccggatgtgcaggggttagctgtgctcctgtcgagtgaaagatatgcgactaacagt
cctattgaatacagcgatgttgctgcttatcgtctatcactaggagaagatacaaaagca
atcaaccagctgaatacgctgatccaagaaggaaaagaaatggcatctttgctatataca
taccgtagctgtgtaaaagctctacctcagcttcctgattcaatgaagcataaccaagcg
gacttgtatctggaaacctatcaagttcttgacttggaaatgagtcgtttacgtgaaatt
cagagatggcaagcttctgctgcttctaagttggcggctgacatgcagagattctctagg
ccagagagactggttaatggacccacgatcactcatttttggtctatgctgaagttgctt
gatgtcctactgcagcttgatcatctcaagaatgcaaaagcaagcatacctaatgatttt
tcatggtacaagagaacgttcactcaagtaagcacccagtggcaggataccgacaccatg
agagaagagctggatgatcttcagatttttctgagcaccagatgggccatcttgttaaat
ttgcatgctgagatgtttcggacaaataccgttgaggatattctacaggttcttatagta
ttttgtgtggagtcattggaattggactttgctcttctttttcctgagcgccatacccta
ctccgtgtcctcccagttttggttgtcctagcaacctcatcagagaaggagagtgagtcg
ctttataagagggtgaagataaatcgtcttctcaatgtttttaagaatgacccagtgatc
ccggcatttccagatctgcatctctctcctgctgcaattttgaaggaattgtcatcatat
tttcaaaaaatttcgagtcaaactcgtctccttgctcttcaagcacctcatgaaattcag
ggtcgagagctacaagattatcagaggcattacttgattttgaatcacatgggaactatg
agagctgagcatgacgacttctctatacgttttgcctctgctatggatcagatgataaga
ttgaagtcatcggatggcgtggataatgactggtcccgagatatcaaagggaacatgtat
gatattgttgttgaaggcttccagcttcttagtcgttggactggcaggatttgggaacaa
tgtgcctggaaattctctcgccctattccagattcgcaacaaaaccccacgacatgtttt
gactatgaaaaggtagtacgctataactatactgctgaagaacgaagggctctgcttgaa
ttaattggttacataaagagtgttggattgatgatgcagcattgtgatactttagtgtct
gaagctttgtgggaaacaatacacatggaggtccaagattttgtacaggataaacttgat
actatgcttcgtacaacatttagaaagaagaaggacctttctcggattctctctgatatg
cgaaccctctcagcagattggatggccaacactagtaaggcagacccagagcagcactca
ctacaccaagaaactgaggaaatgagacaaaacacattttacccaagaccagttgcacca
acagctgcacagattcattgtttgcaatttcttatatgtgagcttgtatctggtggtaat
ctgagaaaacctggaggactatttgggaatagtggctctggcatacctgtggaagatctt
aaacaactagagacatttttctacaagcttagttttttcttgcatattttggattataca
gcgactattggtactctaactgatcttgggtttctttggttcagagaattttaccttgaa
tcttctcgtgtcattcagtttccaattgaatgctcgctcccgtggatgctggtggaccat
gtcattgaatcacaagatgctggtcttctcgaaagcattttgattccatttgacctttac
aatgactctgctcaacatgcactaacttctctcaagcagagatttctttatgatgaaatt
gaagctgaggttgatctttgcttcgatcttcttgctcagaagcttaatgagatcatcttt
acatattacaagagctgtgcagcaagtactcttcttgatagttcatttacatatgcatgc
gatgatggtgagaagtactttgtcaaacctttgcgatttgacgcgattttcaagttaagg
agagtaatggttttagggaggacaattgacctaagaagcataattactcagagaatgaac
aaaatattcagggaaaatattgactttttgcttgagcgctttgaaaatggagatctatgt
ggtgttgtggaactgcaacaactattggatattttggagcttacacatcaatcaatatca
agatttcttgaattggattcttattctcttatgcttagcgagatgcaagagaatctttcg
ttggtttcttattcaagtcgcatctcttctcagatatggagtgagatgcagacagatttc
ttgccgaatttcatcttatgtaataccacacagcggtttgtccgatccataaaaggaact
caccactctttgcatagatcaagtgcttctactgggaagccctacttctattgtggatca
catgatttgaccatggcataccagggtcttgctgggctgtaccgtgacttttttggagtc
cctcatatgtttgcagttgttaaacttcttggttccagatcattgcctgcaatcatccgt
gctttactggatcatatatcaagtaagattacaggtttggtaccgaaaataaatgcactg
caagaagcattaccaaaatctattgggcttctttcatttgatggtggtatagcaggttgt
cagaagatagttcatgaaatattgacgtgggaagcgaaatcagaagttaaaactgaagtt
cttcatgaccttaaggaaattggaagtgctttgtattggatgagcattctggacattgtt
ttgagacaaatcgacactacacagttcatgcagtcagctccgtggctaggactggttcca
ggaaatgatgggcaagtgaaacatgcctactcagataatactccatttaccacactttta
agtgctgccaccaatgctgtgacatcaagccctgcatgcccaaatccatctacgtttctt
gtcatgtcaaagcaagctgaagctgccagtctgctgtacaaatcaaacctcaattctggt
agtgtgctggagtatgctcttgcattcacaagtgctgctctggatagacactatagcaaa
tggagcgcaactccaaaaacaggttttattgacattactacttcaaaggatttctatcgc
atttttagcggtcttcagtatagttacttagaagatagcattaacaatccttcaaagaaa
caggaaatgctgggtgattctgtagcatgggctggctgtacgatcatgtacttactggga
cagcagcagcacttcgagctttttgatttctcctatcaatttctcaacgtggcagaagta
gaaagtgcgacagtttcaaactatcaatcttcagagaggactaaaagttcaaatttcttg
caaggctacgagggcatccttgaagcgatgaggaaggctaggaggctcaataaccatgtt
ttctcgatgttgagggcacgatgcccccttgaggacaaggttgcatgtgcgatcaagcca
agtggggcaccggttcaccggatgaagtttatgaacaccgtttctgcattcgagacattg
ccacaaagagacacctaa
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