Mycolicibacterium fluoranthenivorans: HZU40_09605
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Entry
HZU40_09605 CDS
T11067
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mflu Mycolicibacterium fluoranthenivorans
Pathway
mflu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZU40_09605 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflu03400
]
HZU40_09605 (recD)
Enzymes [BR:
mflu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HZU40_09605 (recD)
DNA repair and recombination proteins [BR:
mflu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZU40_09605 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
RecD_N
SH3_13
PhoH
TraI_hel_assoc_N
AAA_16
AAA_28
Herpes_Helicase
nSTAND3
T2SSE
AAA_25
NTPase_1
Mg_chelatase
AAA_29
TrwB_AAD_bind
SLFN-g3_helicase
DEAD
AAA_5
SRP54
HTH_IclR
AAA
CbiA
NACHT
MukB
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
QNJ94488
UniProt:
A0A1G4WP43
LinkDB
All DBs
Position
complement(1840597..1842207)
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AA seq
536 aa
AA seq
DB search
MTPDFEPADTHVAQRLAALTGETDESVILAVALAVRALRGGSVCVDLRAAAGEFGTDADT
WLAAVRASPLIGPPAVLHLFGDLLYLDRYWREEQQVCDDALALLAAQPPGPTPEVARLFP
DGFDEQRAAAKLALAQGLTVLTGGPGTGKTTTVARLLALLAEQAALAGRSSPRIALAAPT
GKAAARLQEAVRAEVDRLDPVDRARLTGLPATTLHRLLGALPNTSSRFRHHRGNRLPHDV
IVVDEASMVSLTMMARLLEAVRPQTRLLLVGDPDQLASVEAGAVLADLVDGLGADRVAAL
HTSHRFGESIGALATAIRDGDADRALEVLAAGGPHIAWTPTSDALRDVLLPHALRLREAA
LLGDAPGATSVLDEHRLLCAHRHGPFGVTHWNRQVQRWLTEATGEPMWSVWYPGRPVLVT
ANDYGLKLYNGDTGITVATPEGLRVAIGAASFSTGRLTEVDTMHAMTIHKSQGSQADEVT
VLLPSEDSRLLTRELFYTAVTRAKTAVRVVGSAAEVRAAIDRQAVRATGLGPRLRR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtgactccggatttcgaaccggccgatacccatgtggcacaacgattggcggcgctgacc
ggcgagaccgacgagtcggtgatcctggcggtggccctggcggtccgcgccctgcgcggt
gggtcggtgtgcgtggatctgcgcgccgcggcaggcgagttcggcacggacgccgacacc
tggctggccgccgtgcgggccagtccgctgatcggtcccccggcggtgctgcacctgttc
ggcgatctgctctacctggaccggtattggcgcgaggagcagcaagtgtgcgatgacgca
ctggccctgctggccgcccagccaccggggcccacaccggaggtggcgcggctgttcccg
gacggattcgacgagcagcgtgcggccgcgaaactggccctggcccagggcctcaccgtc
ctgaccggcggtcccggaacgggtaagacgaccacggtggcccggctgctcgcgctgctc
gcggagcaggcggccctggccggccggtcgtcgccgcggatcgcgctggcggcgccgacg
ggtaaggcagccgcgcggctgcaagaggcggtccgcgccgaggtggaccgcctcgacccg
gtggatcgcgcgcggttgaccgggctgccggcgaccaccttgcatcggcttctcggggca
ctgccgaacacgtcgtcgcggttccgtcatcatcggggcaatcggctgccgcacgatgtc
atcgtcgtcgacgaggcgtcgatggtgtcgctgaccatgatggcccgactactggaagcc
gtccgcccgcagacccgcttgctcctggtcggtgaccccgaccaactggcctcggtggaa
gccggtgcggtgctggccgacctggtggacggcctgggcgccgaccgtgtcgccgcgctg
cacacctcgcaccgcttcggcgagtcgatcggcgcgctggccacggcgatccgggacggt
gacgccgaccgcgcactggaggtcctcgccgcgggtggaccgcatatcgcgtggacaccc
accagcgatgcccttcgggacgtgctgctgccgcatgcgctgcggttgcgtgaagccgcg
ctgctgggcgatgccccgggggccacgtcggtactggatgaacatcggttgctgtgtgcg
caccggcacggcccgttcggggtgacgcactggaaccgtcaggtgcagcgctggctgacc
gaggcgaccggcgaaccgatgtggtcggtgtggtacccggggcggccggtgctggtgacc
gccaacgattacggactcaagttgtacaacggggacaccgggatcaccgtggcgacgccg
gagggcctgcgggtggcgatcggtgccgcgtcgttctcgaccggccgcctcaccgaggtc
gacaccatgcacgcgatgacgatccacaaatcccagggcagccaggccgatgaggtgacc
gtgctgttgccgtcggaggattcgcgactgttgacgcgggagctgttctacaccgcggtg
acgcgcgccaagacggcggtgcgcgtggtggggtcagctgccgaagtccgcgcggctatc
gaccgccaggccgtgcgcgcgaccggactcggcccgcgcctgcgccggtag
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