Mycolicibacterium fluoranthenivorans: HZU40_18970
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Entry
HZU40_18970 CDS
T11067
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mflu Mycolicibacterium fluoranthenivorans
Pathway
mflu03030
DNA replication
mflu03430
Mismatch repair
mflu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZU40_18970 (dnaE)
03430 Mismatch repair
HZU40_18970 (dnaE)
03440 Homologous recombination
HZU40_18970 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflu03032
]
HZU40_18970 (dnaE)
03400 DNA repair and recombination proteins [BR:
mflu03400
]
HZU40_18970 (dnaE)
Enzymes [BR:
mflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZU40_18970 (dnaE)
DNA replication proteins [BR:
mflu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZU40_18970 (dnaE)
DNA repair and recombination proteins [BR:
mflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZU40_18970 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QNJ90361
UniProt:
A0A1G4WDX4
LinkDB
All DBs
Position
3813604..3817140
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSSFVHLHNHTEYSMLDGAAKVKPMIAEAQRLEMPAIGMTDHGNMFGASEFYNKATDAG
IKPIIGIEAYIAPGSRFNTKRITWGDPGQKGDDVSGSGSYTHMTMVAENATGLRNLFKLS
SLASFEGQLGKWSRMDAELIAENAEGIIATTGCPSGEVQTRLRLGHQKEAVEAAAKWQDI
FGKDNFFLELMDHGIEIERRVREGLLEIGRKLGIRPLATNDCHYVTREASHNHEALLCIQ
TGKTLSDPARFKFDGDGYYLKSAADMRALWDPQVPGACDSTLLIAERVQSYADVWTPRDR
MPVFPVPEGHDQASWLRHEVLAGLNRRFPDGVPPEYLERADYEIKVICDKGFPSYFLIVA
DLISYAQSVNIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDIDID
FDDRRRGEMVRYASERWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRITKAL
PPPIMAKDISVAGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRNAGVHAC
AVVMSSEPLVDAIPMWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALENIK
ANRGIDLDMDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMFIAQKVA
SYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEAAVKALWDTILPFAGYAFNK
SHAAGYGLVSFWTAYLKANYQAEYMAGLLTSVGDDKDKAAVYLSDCRRLGITVLPPDVNE
SVHNFASVGQDIRYGLGGVRNVGGNVVQSIINGRKEKGKYTDFSDYLNKIDITACNKKVT
ESLIKAGAFDSLGHPRKGLFLVHADAVDSVLGTKKAEAIGQFDLFGGGDADTGIESVFAI
PVPDGEWEDKHKLALEREMLGLYVSGHPLDGVAHLLSAQVDTQIPAILEGDIANDTQVRI
GGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSAFGADIADDAVVLVGAKVAI
RDDRISLIANDLVVPDFSNAQADRPLALSLPTRQCTVDKVTALKQVLARHPGVAQVHLRL
ISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctccttcgtgcacctgcacaaccacaccgaatactcgatgctcgacggtgcg
gcgaaggtcaaaccgatgatcgccgaggcgcagcgcctcgagatgcccgctatcgggatg
accgaccacggaaacatgttcggtgccagtgagttctacaacaaggccaccgacgcgggt
atcaagccgatcatcggcatcgaggcgtacatcgctcccgggtcccggttcaacaccaag
cgcatcacctggggcgacccgggacagaagggtgacgacgtctcgggtagcggttcctac
acccatatgacgatggtcgccgagaacgcgaccgggctgcgcaacctgttcaagctgtcg
tcgttggcctccttcgaggggcagctcggcaaatggtcgcggatggacgccgagctgatc
gccgagaatgccgagggcatcatcgcgaccaccggttgcccgtccggcgaggtgcagacc
cggctgcggctcggccaccagaaagaggcggtcgaagcggcggccaagtggcaggacatc
ttcggcaaggacaacttcttcctggagttgatggaccacggcatcgagatcgagcgccgg
gtccgcgaagggctgctcgagatcggccgcaagctgggcatccggccgctggccaccaac
gactgccactacgtgacgcgcgaggcctcgcacaaccacgaggccctgctgtgcatccag
accggcaagacgctctcggatccggcccggttcaagttcgacggcgacggctactacctg
aaatccgccgccgatatgcgggcgttatgggacccgcaggttccgggagcctgtgattcc
accctgctcatcgccgagcgggtgcagtcctacgccgacgtgtggaccccccgcgaccgt
atgccggtgttcccggtgcccgaaggtcacgaccaggccagctggctgcgccacgaggtc
ctggccggtctgaaccgtaggttccccgacggtgtgccgccggagtacctcgagcgggcc
gactatgagatcaaggtcatctgcgacaagggcttcccgtcctacttcctgatcgtggcc
gacctcatcagctacgcccagtcggtcaacatccgggtcgggccgggccgtggttcggcg
gccgggtcgctggtggcctacgccatgggcatcaccaatatcgacccgataccgcacggt
ctgctgttcgagcgcttcctgaacccggaacgcccgtcggcccccgatatcgatatcgac
ttcgacgaccgtcgccgcggtgagatggtgcgctacgcctcggaacggtggggcagcgac
cgggtggcccaggtcatcaccttcggtaccatcaaaacgaaagcggcactgaaggactcg
gctcgtgtgcactatgggcagcccgggttcgcgatcgccgaccggatcaccaaggcgctg
cccccgccgatcatggccaaggacatctcggtggccgggatcaccgatcccacccatgag
cgctacaaagaggccgccgaggtccgcgccctgatcgacaccgatccggacgtccgcacc
atctacgagacggcgcgcggactggaagggctggtccgcaacgccggcgtgcacgcctgc
gccgtcgtcatgagttccgagccgctcgtcgacgccatcccgatgtggaagcgggcgcag
gacggcgcgatcatcaccgggtgggactacccgtcgtgtgaggccatcggcctgctgaag
atggacttcctgggcctgcgcaacctcaccgtcatcggtgatgccctggagaacatcaag
gccaaccgcgggatcgatctggacatggatcaccttccgctcgatgatccggccacctac
gaattgctttcccgcggagacactctgggtgtgttccagctcgacggcggacccatgcgg
gacctgctgcgccggatgcagcccaccgggttcaacgatatcgtcgccgtgttggcgctc
taccggcccggcccgatgggcatgaatgcgcacaacgactacgccgaccgtaagaacggc
cgtcagccgatcaagcccatccatcccgaactggaggaaccgctcaaggagatcctggcc
gagacctacggcctgatcgtctaccaggaacagatcatgttcatcgcccagaaggtggcc
tcgtacaccatgggcaaggccgacgcgctgcgtaaggccatgggcaagaagaagcttgag
gtgcttgaggccgagtacaagggcttcaaggaggggatgacggccaacggcttctccgag
gccgcggtgaaggcgttgtgggacaccatccttcccttcgccggctacgcgttcaacaag
tcgcacgccgcgggctacgggctggtgtcgttctggacggcctacctgaaggcgaattac
caggccgagtacatggccggcctgctgacctccgtcggcgatgacaaggacaaggccgcg
gtatacctgtcggactgccgccggctcgggatcacggtgctaccaccggatgtcaacgaa
tcggtgcacaacttcgcctcggtcggccaggacatccgctacggcctcgggggtgtgcgc
aacgtcggcggcaacgtggtgcagtcgatcatcaacgggcgtaaggagaaggggaagtac
accgacttctccgactacctgaacaagatcgacatcaccgcgtgcaacaagaaggtgacg
gaatccctgatcaaggcgggggcgttcgactcactcggtcatccgcgcaagggcctgttc
ctggtacatgccgacgccgtggactcggtgctgggcaccaagaaggccgaggcgatcggc
cagttcgatctgttcggcggcggcgacgccgacaccgggatcgagtcggtgttcgccatc
ccggtgcccgacggcgagtgggaggacaagcacaagctcgccctggaacgcgagatgctg
ggtctctacgtgtccggtcatccgctcgacggggtggcgcatctgctgagcgcccaggtc
gacacccagatcccggcgatcctggaaggcgatatcgccaacgacacccaggtgcgcatc
ggtggcattctggcttcggtcaaccgacgggtcaacaagaacggattgccctgggcctcg
gcgcaattggaggatctcaccggcggtatcgaggtgctgttcttcccgcagacctattcg
gcgttcggtgccgatatcgccgacgacgccgtggtgctggtcggtgccaaggtggccatt
cgcgatgaccggatctcgttgatcgccaatgaccttgtggtgccggacttctcgaatgca
caggccgaccggccgctggcgctcagcttgcccacccggcagtgcacagtggacaaggtc
accgcgctcaagcaggtgctggcccgccatcccggtgtggcacaggttcatctgcgcttg
atcagcggggaacgcatcaccactctggagctggaccaatcgctgcgggtgacaccctcc
tcggcattgatgggggatctgaaggccctgctcggcccgggctgtctgggcggctga
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integrated database retrieval system
