Mycolicibacterium fluoranthenivorans: HZU40_24165
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Entry
HZU40_24165 CDS
T11067
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mflu Mycolicibacterium fluoranthenivorans
Pathway
mflu03030
DNA replication
mflu03430
Mismatch repair
mflu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZU40_24165
03430 Mismatch repair
HZU40_24165
03440 Homologous recombination
HZU40_24165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflu03032
]
HZU40_24165
03400 DNA repair and recombination proteins [BR:
mflu03400
]
HZU40_24165
Enzymes [BR:
mflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZU40_24165
DNA replication proteins [BR:
mflu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZU40_24165
DNA repair and recombination proteins [BR:
mflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZU40_24165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QNJ96305
UniProt:
A0A7G8PPN9
LinkDB
All DBs
Position
4857027..4858883
Genome browser
AA seq
618 aa
AA seq
DB search
MCRTVTRGTDRSRRSSVYPDTVSPVSQLSFADVEPLADIALADTTFVVVDLETTGGRAAG
DGHDAITEIGAVKVRGGVVLGELATLVDPGRAIPPQIVQLTGITSAMVHDAPRIDSVLPA
FLEFARGAVLVAHNAGFDIGFLRAAAERLGLTWPRPPVLCTVRLARRVLTRDEAPSVKLS
ALARLFGAGTTPTHRALDDARATVDVLHGLIERVGNQGVRTYPELRAYLPDKAAPQRRKR
HLATGIPGTPGVYLFRGPGDEVLYIGTAVDLYRRVSQYFTGADPRTRMKEMVALATRVDH
VECAHELEAGVRELRLLAAHAPPYNRRSKFPRRWWWIVLTDEAFPRFSVVRAPRSARALG
PFTARGDAAATADILARGTGVRTCTARLSRTAEHTCADHELAPCPAPRGADAAGYAPATR
AAAALIEGTDSSAFGTLLAQIEALAGLHRYESAARLRDHTADAVDVVCRGQRLQALSAVD
ELVAARPDGRGGWELAVIRHGQLASAGCARRGVPPMPVVDAICAAAQTILTESAPLGGAL
VEETGLIARWLAGPGVRIVRAQPGYASPVGSAARWADWAAAARSARLTAQQQDGTDLADD
RFGIDPPARKAVTVKLSG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ctgtgccgcaccgtaacgaggggtaccgacagatcccgccgctcgtcggtctacccagat
accgtctcccctgtgtcgcagctgagcttcgccgatgtcgagccgctcgccgatatcgca
ctcgccgacaccaccttcgtcgtggtcgatctggagaccaccggcggacgggccgccggt
gacggccatgacgccatcaccgagatcggcgcggtcaaggtgcgcggcggtgtggtgctc
ggtgaactggccacgctcgtcgacccgggccgggccatcccgccgcagatcgttcagctg
accggcatcacctcggcgatggtgcacgacgccccgcggatcgacagcgtgctacccgct
ttcctggagttcgcccgcggcgcggtgctggtggcccacaacgccgggttcgacatcggg
ttcctgcgggccgcggccgagcggctggggctcacctggccgcgcccgccggtgctgtgc
accgtgcggctggcacgccgggtgctcacccgcgacgaggcgcccagcgtcaagctctcg
gcgctggcccggctgttcggcgccggcaccacccccacccaccgcgcgctcgacgacgcc
cgcgccaccgtcgacgtgctgcacggtctcatcgagcgggtcggcaaccagggtgtgcgc
acctacccggaactgcgcgcgtacctgcccgacaaggccgcaccccagcgccgcaagcgc
catctggccaccggcatccccggcacgcccggggtctatctgttccgcggcccgggcgac
gaggtgctctacatcggcaccgcggtggacctgtaccgccgggtcagccagtacttcacc
ggagcggacccccgcacccgcatgaaagagatggtggcgctggccacccgcgtcgaccac
gtcgagtgcgcgcatgagctggaggccggggtgcgtgagctgcgactgctggccgcgcac
gcaccgccgtacaaccggcgttccaagttcccccgccggtggtggtggatcgtgctcacc
gatgaggcgtttccgcgtttctcggtcgtccgggcaccgcgcagcgcccgcgccctcggc
ccgttcaccgcgcgtggcgacgccgccgcgaccgcggacatcctggcccgcgggacgggt
gtgcgcacctgtacggcgcggctgtcccgaaccgccgaacacacctgcgccgaccacgaa
ctggccccgtgccccgccccgcgcggcgccgatgccgccggctacgccccggcgacccgg
gcggccgccgcgctcatcgagggcaccgacagttcggcgttcggcaccctgctggcccag
atcgaagcgctggccggcctgcaccggtacgagagtgccgcccggctgcgcgaccacacg
gccgacgcggtggacgtggtgtgccgcggccagcggctgcaggcgttgtccgccgtcgac
gaactggtcgccgcccggcccgacggccgcggcggctgggagctggcggtcatccggcac
ggacagctggcgtcggccggatgtgcgcgccgcggcgtgcccccgatgccggtggtggac
gccatttgcgctgcggcacagacgattctgaccgaatcggcacccctgggcggggctctg
gtcgaggagaccggactgatcgcacggtggctggccggtcccggcgtgcgcatcgtgcgc
gcccaaccgggctatgccagccccgtcgggtccgccgcccgctgggccgactgggcggcg
gcggcgcggtcggcccggctgaccgcgcagcagcaggacggcaccgacctcgccgacgac
cggttcggaatcgacccgccggcccgaaaggccgttaccgtcaagctttctgggtga
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