Mycolicibacterium fluoranthenivorans: HZU40_32620
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Entry
HZU40_32620 CDS
T11067
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mflu Mycolicibacterium fluoranthenivorans
Pathway
mflu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZU40_32620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflu03019
]
HZU40_32620
03400 DNA repair and recombination proteins [BR:
mflu03400
]
HZU40_32620
Enzymes [BR:
mflu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZU40_32620
Messenger RNA biogenesis [BR:
mflu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZU40_32620
DNA repair and recombination proteins [BR:
mflu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZU40_32620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
AAA_22
KORA
Motif
Other DBs
NCBI-ProteinID:
QNJ92797
UniProt:
A0A7G8PEN1
LinkDB
All DBs
Position
complement(6625778..6627940)
Genome browser
AA seq
720 aa
AA seq
DB search
MSSRGPRILPPISSRPWRSPVPPRSPSLPTPTRTDAQAILEQLAGQQAVLRDDQWTAIEA
LVVGRRRALVVQRTGWGKSAVYFIAAKLLRAAGRGPTVIVSPLLALMRNQVAAAQRAGVA
AATINSSNVTEWQDVHRRVIAGELDVLLVSPERLNNPDFRDAVLPALAADAGLVVVDEAH
CVSDWGHDFRPDYRRIRTLIAELGSDIPVLATTATANDRVVDDVAAQLGVGGADTLVLRG
GLDRESLRLSVVQAGGPAQRAAWVAAQLDSLPGSGIIYTLTVSQAHDIAALLRERGFPVA
AYTGSTEAAEREQLEADLLANRVKALIATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQV
GRAGRATASAEVILLPGREDADVWRYFSSVAFPSEAMVRNVIGALEPDRALSTAALEPLV
DLNRSRLEMVLKVLDVDGAVRRVKGGWISTGQPWGYDEPRYRKLAEARQREQQAMLDYQS
TSGCRMAFLRGQLDDPDLAADHRCERCDNCVGSRYPNAVDVSAAESAREQLMRPGVEIAP
RRQWPTGLASLGVDLSGRIGDGPEPGRVIGRLTDLGWGTRLRRLLDEPDGEVPDDLVQAA
IAVLKAWDWKTRPTAVLALDSATRPQLIRSTAARLAQLGRLTDLGVLRYTPEHRPVTAAN
SAYRVAGLRDAWEVPVHVDAGPVLLVDDVTDTGWTLTMAARVVRAAGASAVLPFALAAVR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccggggtcctcgaatccttccacccatttcatcccgaccctggaggtcaccc
gtgccaccccgatccccaagcctgccaacacctacgcgtactgacgcgcaggccatcctg
gagcagctcgcaggccagcaggcggtactgcgcgatgatcaatggacggccatcgaagcg
ttggtcgtcgggcgcaggcgtgcgctggtggtgcaacgcaccggctggggcaaatcggcg
gtgtacttcatcgccgccaagctgcttcgggccgccgggcgcgggccgacggtgatcgtg
tcgccgctgctggcgctgatgcgcaaccaggtggcggcggcgcagcgggccggggtggcc
gcggcgacgatcaactccagcaacgtcaccgaatggcaggacgtgcatcgacgggttatc
gcgggtgaactcgatgtgttgctggtcagcccggagcggttgaacaatccggacttccgg
gacgccgtgctgcccgcactggccgccgacgcggggttggtggtggtcgacgaagcgcac
tgcgtctcggactggggccacgatttccgccccgactaccgccggatcaggacgctgatc
gccgaattgggttccgacataccggttctggcgacgacggcaacagccaacgaccgagtg
gtcgacgatgtcgccgcccagttgggcgtcggtggagcggacaccctggtgctgcggggt
gggctggaccgggagtcgctgcggttgtcggtggtgcaggccgggggaccggcccaacgc
gcggcatgggttgccgcgcaactggattcgctacccgggtcgggaatcatctacacgctg
acggtgtcacaggcccacgatatcgccgcgctgctgcgggaacgcggattcccggtggcg
gcctacaccgggtcgacggaggccgccgaacgcgagcagttggaggctgacctgctggcc
aaccgggtcaaggcgctgatcgccacctcggcgctggggatgggtttcgacaaacccgat
ctcgggttcgtcgtgcatctgggtgcgccgtcctcaccgatcgcctactaccaacaggtg
ggccgcgccggtcgtgccaccgccagcgcagaggtgatcctgctgcccggccgcgaggac
gccgacgtgtggcggtatttctcctcggtggcgttcccgtcggaagcgatggtgcgcaac
gtgatcggcgcgctcgagccggaccgggcgctgtccactgccgcgctggaacccctggtg
gacctcaaccggtcgcgtctggagatggtgctcaaggtgctcgacgtcgacggcgcggtg
cgccgggtcaagggcggctggatcagcaccggccagccgtggggctacgacgaaccgcgg
taccgaaagctggcggaggcccggcagcgcgagcagcaggccatgctcgactaccagtcg
acatccgggtgccggatggcattcctgcggggtcagctcgatgaccccgacctggcggcc
gatcatcggtgcgagcgctgtgacaactgtgtcggctcccgttacccgaacgcggtcgat
gtgtcggcggccgaatcggcccgcgagcagctgatgcgccccggggtggagatcgccccg
cgccgccaatggcccaccgggctggcgtccctgggtgtcgacctgtccggccgcatcggg
gacggcccggaacctggccgggtgatcgggcggctcaccgacctgggttggggcacccgg
ctgcggcgactgctggacgagcccgatggtgaggtccccgatgacctggtgcaggccgcc
atagcggtgctcaaggcatgggactggaagacccggcccaccgcggtgctggcgctggac
tcggccaccaggccgcagctgatccgctcgaccgcggcccggctggcccagctgggcagg
ctcaccgatctcggggtgctgcggtacacacccgagcaccggcccgtcaccgcggcgaac
tcggcttaccgggtggcgggactgcgggatgcgtgggaggtgccggtccacgtggatgcg
ggaccggtgctgctcgtcgacgatgtcaccgataccgggtggacgctgaccatggcggcg
cgggtggtgcgggctgccggtgcgtcagccgttctcccgttcgcgctcgccgcagtgcgg
tga
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