Mycolicibacterium flavescens: NCTC10271_00387
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Entry
NCTC10271_00387 CDS
T07767
Symbol
topA
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mflv
Mycolicibacterium flavescens
Brite
KEGG Orthology (KO) [BR:
mflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflv03032
]
NCTC10271_00387 (topA)
03400 DNA repair and recombination proteins [BR:
mflv03400
]
NCTC10271_00387 (topA)
Enzymes [BR:
mflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC10271_00387 (topA)
DNA replication proteins [BR:
mflv03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10271_00387 (topA)
DNA repair and recombination proteins [BR:
mflv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10271_00387 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
VEG38454
LinkDB
All DBs
Position
1:373634..376441
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AA seq
935 aa
AA seq
DB search
MADGDRGSGRNGSVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRNAADVPAKY
KSEPWARLGVDVDHNFEPLYIISPEKKSTVAELKDLLKNVDELYLATDGDREGEAIAWHL
LETLKPRIPVKRMVFHEITEPAIRAAAEDPRDLDNDLVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAELDASVSDPQASPPMFTAKL
NTVDGRRVATGRDFDSLGQVKKPDEVLVLDQAAATALAGGLRGAQLAVSSVEQKPYTRRP
YAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSASAVEAARNQAR
QLYGEEYLHPSPRQYTRKVKNAQEAHEAIRPAGDVFSTPGQLHGQLDTDEFRLYELIWQR
TVASQMADARGTTLSLRISGTASSGEQVVFNASGRTITFAGFLKAYVESIDDQAGGEADD
AESRLPNLEQGQRVDAKELTADGHNTAPPARYTEASLIKALEDLGIGRPSTYSSIIKTIQ
DRGYVVKRGSALVPSWVAFAVIGLLEQHFGRLVDYGFTAAMEDELDEIAAGNERRTNWLN
NFYFGGDHGVEDSIARSGGLKKLVGVNLEEIDARQINSIKLFDDDQGRPIHVRVGKNGAY
LERMVPDEDGEPGELKPQRANLKDDLTPDELTLELAEKLFATPQEGRSLGVDPETGHEIV
AKDGRYGPYVTEVLPEPPDDGEAGSTAKKGKKPTGPKPRTGSLLRSMDLETVTLEDALRL
LSLPRVVGVDPNTGEEITAQNGRYGPYLKRGTDSRSLATEEQMFDITLDEALKIYAEPKR
RGGQRAAAPPLRELGEDPATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERAAE
LLADRRARGPVKRTKKAGAKKTAKKAGAKKAAKKS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatggggaccgcggcagcggccgtaacggaagcgtccggcggctcgtcatagtc
gagtcgcctaccaaggcgcgcaagatagcgggctacctgggctccaattacatcgtcgag
tcgtcccgtgggcatatccgcgacctgccccgcaacgccgccgacgtgcccgcgaagtac
aaatccgagccgtgggcccgcctcggggtggacgtcgaccacaacttcgagccgctctac
atcatcagccccgagaagaagagcacggtcgccgagctgaaagacctgctcaagaacgtc
gacgagctgtacctggccacggacggcgaccgcgagggcgaggcgatcgcctggcatctg
ctcgagacgctcaagccccgcatccccgtcaagcggatggtgttccacgagatcaccgaa
ccggccatccgcgccgccgccgaggacccccgcgacctggacaacgacctggtcgacgcg
caggagacacgccgcatcctggaccggttgtacggctacgaggtcagcccggtcctgtgg
aaaaaggtcgcgccgaagttgtcggccggccgggtgcagtcggtcgcgacgcgcatcatc
gtgcagcgcgaacgcgaacggatggcgttccgcagcgcagggtactgggacgtcaccgcc
gaactcgacgccagtgtctccgacccgcaggcctcgcccccgatgttcaccgccaagctg
aacacggtcgacgggcgccgcgtggccaccggccgcgacttcgactcgctgggccaggtc
aaaaagcccgacgaggtactggtgctggaccaggccgcggcgacggcgttggcgggtggt
ctgcgcggggcgcagctggcggtcagctcggtcgagcagaagccctacacccgcaggccg
tacgcgccgttcatgacctcgacgctgcagcaggaggcgggccgcaagctgcggttctcc
tcggagcgcacgatgagcatcgcgcagcggctctacgagaacggctacatcacctatatg
cgcactgactcgacgacgttgtcggcgagtgcggtcgaagcagcccgcaaccaggcccgt
cagctctacggcgaggagtatctgcatccgtcgccgcggcagtacacccgcaaggtgaag
aacgcccaggaggcgcacgaggccatccggcccgccggtgacgtgttctccacgccgggt
cagctgcacggccagctcgacaccgacgagttccggctctacgagctgatctggcagcgc
accgtggcctcccagatggccgacgcgcgtggcaccacgctaagcctgcggatctccgga
accgcgagctcgggagagcaagtcgtcttcaacgccagcggccggaccatcaccttcgcc
ggctttctgaaggcctacgtcgaaagcatcgacgatcaggcaggcggcgaggccgacgac
gccgagagccggctgccgaatctggagcagggccagcgcgtcgacgccaaggagctcacc
gccgacgggcacaacacggcgccgcccgcccgctataccgaggcttcgctgatcaaggct
ctcgaggacctcggcatcggcaggccgtcgacgtactcgtcgatcatcaagacgatccag
gaccgcggttacgtcgtgaagcggggcagcgcgctggtgccgtcgtgggtggcgttcgcc
gtcatcgggctgctcgaacagcacttcggccgcctagtcgactacgggttcaccgcggcg
atggaagacgaactcgacgagatcgccgccggtaacgagcgacggaccaactggctcaac
aacttctacttcggcggcgatcacggggtcgaggactcgatcgcccgctcgggtgggctc
aagaagctcgtcggggtgaacctcgaggagatcgacgcccggcagattaactccatcaaa
ctgttcgacgacgatcagggccggccgatccatgtgcgggtgggcaagaacggtgcgtac
ctggagcggatggtccccgacgaggacggtgagcccggcgagctcaaaccgcagcgggcc
aacctcaaggacgatctcacccccgacgagctgaccctcgagctcgccgaaaagcttttc
gccacaccgcaagaaggccgatcactgggcgtcgaccccgaaaccgggcacgagatcgtc
gccaaggatggtcgttacggtccgtatgtcaccgaggttctgcccgaaccgcccgacgac
ggcgaggccgggtcgacggcgaagaagggcaagaagccgacgggtccgaagccgcgcacc
ggttcgctgttgcggtcgatggatctggagacggtgacgctggaggatgcgctgcgactg
ttgtctctgccgcgcgtcgtgggcgtcgacccgaacaccggcgaggagatcaccgcacag
aacggccgctacggcccataccttaagcgcggcacggactctcgctcgctggccaccgaa
gagcagatgttcgacatcacgctcgacgaggccttgaagatctacgccgaacccaagcgc
cgtggcgggcagcgggccgcggccccgccgttgcgtgaactcggtgaggatccggcgacc
ggcaagccgatggtgatcaaggacggccggttcggcccgtatgtcaccgacggggagacc
aacgccagcctgcgcaagggcgacgacgtcctgtcgatcaccgacgaacgcgccgccgaa
ctgctcgccgaccgtcgcgcgcgcggtccggtgaagcggacgaagaaggcaggggcgaag
aagactgcgaagaaggccggagcgaagaaagccgccaagaagagctag
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