Mycolicibacterium flavescens: NCTC10271_00878
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Entry
NCTC10271_00878 CDS
T07767
Symbol
mutM_1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mflv
Mycolicibacterium flavescens
Pathway
mflv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10271_00878 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflv03400
]
NCTC10271_00878 (mutM_1)
Enzymes [BR:
mflv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC10271_00878 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC10271_00878 (mutM_1)
DNA repair and recombination proteins [BR:
mflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC10271_00878 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
VEG38953
LinkDB
All DBs
Position
1:940420..941283
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AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGQTVGRIDVSAFSVLKTFDPPITALHGQTVTGADRWGKYLG
LKVGDLHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGPPGEGAGFDLTEAGTQK
RLAVWVVDDPVKVPGIATLGPDALSLGPDDLAGLLAANRGRIKTVITDQKVIAGIGNAYS
DEILHVARISPFATAAKLTDAQLSALHDAMIGVLSDAVTRSVGQQAATLKGEKRSGLRVH
ARAGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaagcactcgccgaccacctgcgccgccacgccgtcggc
cagacggtgggacgcatcgacgtatcggcgttctcggtgctcaagaccttcgacccgccg
atcaccgcgctccacggtcagaccgtcaccggagccgaccggtgggggaagtacctcggt
ctgaaggtcggcgatctgcacctgatcacccatctgtcgcgcgcggggtggttgcgctgg
tcggacaagctggcggcggcgccgctgaagccgggcaaggggccaatcgcgttgcgtgta
cacctcgggcccccgggcgagggcgcgggtttcgacctcaccgaggccggcacacagaaa
cggctcgcggtgtgggtggtcgacgatccggtcaaggttcccggcatcgccacgctgggt
cccgacgcgctgtcgctggggcccgacgacctcgccgggttgctcgcggccaacaggggg
cggatcaagacggtgattaccgaccagaaggtcatcgcgggtatcggcaacgcctacagc
gacgagattctgcacgtcgcgcggatctccccgttcgcgacggcggccaagctgaccgac
gcgcagctgtcggcgctgcacgacgcgatgatcggtgtgctctccgatgcggtgacccgc
tcggtgggccagcaggccgcgacgctcaagggtgagaagcggtccggcctacgcgtgcac
gctcgagccgggctgccctgccccgtctgcggcgacaccgtgcgcgaagtgtcgttcgca
gacaagtcgtttcagtactgcccgacgtgccagacgggcggcaaggtgctcgccgatcgg
cggctgtcgcggctactcaagtga
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