Mycolicibacterium flavescens: NCTC10271_01703
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Entry
NCTC10271_01703 CDS
T07767
Symbol
rng
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mflv
Mycolicibacterium flavescens
Pathway
mflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10271_01703 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflv03019
]
NCTC10271_01703 (rng)
03009 Ribosome biogenesis [BR:
mflv03009
]
NCTC10271_01703 (rng)
Enzymes [BR:
mflv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NCTC10271_01703 (rng)
Messenger RNA biogenesis [BR:
mflv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10271_01703 (rng)
Ribosome biogenesis [BR:
mflv03009
]
Prokaryotic type
rRNA processing factors
NCTC10271_01703 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
VEG40008
LinkDB
All DBs
Position
1:1763493..1766363
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AA seq
956 aa
AA seq
DB search
MAEDAPTEDLSEDTREAQDSQPESLRVDSLAQVLGTTSERVLEALTALDGRPRTAESALG
EDEAQRVREALADAADAPQTPEPAAAAEPSNGDEPESRTILETPAEEAPQRAEYMPLFVA
PQPVRFEYDADADDDDDDTDDDDDGQDSEDDQSERPSGRRRRRGRRGRGRGRGEQNGDDA
DGDGDADQGGSQGSDSDSDDSDDSDEDNGDDENTGTDGATRRRRRRRRRKSGSADDSDAT
SPDDPPNTVVHEREPRKSTRNDKSGSGDGEIQGISGSTRLEAKRQRRRDGRDAGRRRPPI
LSEAEFLARREAVERMMVVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVG
NIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGAARKIEQALKPGDYVVV
QVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPPDA
GVIIRTASEGVKEEDIRNDVERLAKRWSEIEAKAADITAKKAGAAVALYEEPDVLVKVIR
DLFNEDFTGLTVSGDDAWKTINDYVNSVAPELLPRLTKYEPASADGPDVFAVHRIDEQLT
KAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLR
LRDIGGIVVIDFIDMVLENNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG
LVEAFSTPCTHCSGRGIVLHGDPVDSTSSSGRKSDAGGRRGKRGKRGAKSDDVAVAKVPP
HPAGEHPMFKAMAAANGRHDADDDAADEDTTDDERRDQKPEEVAETDSEAIRTAVIESGE
DDIEDLEDEDFDETDSDEDDEDDESDDDSDEDEDEIDLDSDDDEDDIDDDIEVIGADDSD
DDSDEDDDEDTDDEDSDEDEDSGDYDTRGAASAAVSRGRHRRRAAARPAGPPTNER
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaagatgcccccaccgaagacctatctgaagacacgcgagaagcacaggactct
cagccggagtcgttgagagtcgattcgctggcccaggtgctgggcaccaccagcgagcgg
gttctcgaggcgctgaccgcgctggacggccgccctcgcaccgccgaatccgccctcggg
gaggacgaggctcaacgcgtgcgcgaagcgctcgctgacgctgccgacgcgccgcagacg
cccgaaccggcggctgccgccgaaccgagcaacggagacgagccggagtcccggacgatt
ctggagacccccgccgaagaggcgccgcagcgcgctgaatacatgccgctgttcgtcgcg
ccgcagcccgtccgcttcgaatacgacgccgacgccgacgacgatgacgacgacaccgac
gacgatgacgacggccaggacagcgaggacgaccagtccgagcggccctccggtcgccgt
cgccgccgcggtcggcgcggacggggccgcggtcgcggtgagcagaacggcgacgacgcc
gacggcgacggggacgccgatcagggcggttctcagggttcggactccgacagcgacgac
tcggacgactccgacgaggacaacggcgacgacgagaacaccggcaccgatggcgccacc
cgccgtcgccgtcgccgccgtcgtcgcaaatcggggtcggcggacgacagcgacgcgacc
tcgcccgacgatccacccaacacggtcgtgcacgagcgcgagccgcggaagtcgaccaga
aacgacaagtccggcagcggcgacggcgagatccagggcatcagcggatcgacccggctg
gaggccaaacggcaacgcaggcgcgacggccgagacgcaggcaggcgccgcccgcccatc
ctgagcgaggccgaattcctggccaggcgcgaggccgtcgaacggatgatggtcgtgcgc
gacaaggtccgcaccgaacctccgcacgagggcgcccgctacacgcagatcgccgtgctc
gaggacggcgtcgtcgtcgagcacttcgtgacctcggcggcgtcggcctccctggtcggc
aacatctacctcggcatcgtgcagaacgtgctgccctcgatggaggcggcgttcgtcgac
atcggccgcgggcgcaacggtgtcctctacgccggcgaggtcaactgggaagccgccgga
ctcggcggcgccgcccgcaagatcgaacaggcgctcaagccgggcgactacgtcgtcgtc
caggtcagcaaggaccccgtcggccacaagggcgcccggttgacgacgcaggtgtcgttg
gcgggtcggtacctggtctacgtgcccggcgcctcgtcgaccggcatcagccgcaaactg
cccgacacggaacgccagcgtctcaaggagatcctgcgtgaggtggtgccgccagacgcc
ggggtgatcatccgcaccgcgtccgagggcgtcaaagaagaggacatccgcaacgacgtc
gaacgcctcgccaagcgctggtccgagatcgaggccaaggccgccgacatcaccgccaag
aaggccggtgcggccgtcgcgctctacgaagagcccgatgtgctggtcaaggtgatccgc
gacctgttcaacgaagacttcacgggcctgacggtctccggcgacgatgcgtggaagacc
atcaacgactatgtgaattcggttgcgcccgaacttcttccgcgactgacgaaatacgag
cccgcttccgccgacggccccgacgtgttcgcggtgcaccgcatcgacgagcagttgacc
aaggcgatggaccgcaaggtgtggctgccctcgggcggcacgctcgtcatcgaccgcacc
gaggccatgaccgtcatcgacgtcaacaccggcaagttcaccgggtcgggcggcaacctc
gagcagaccgtcacccgcaacaacctcgaagcggccgaggagatcgtgcgccagctgagg
ctgcgcgacatcggcggcatcgtggtgatcgacttcatcgacatggtgctcgagaacaac
cgcgacctggtgctgcggcggctgaccgaggcgctggcccgggaccggacccgccatcag
gtctccgaggtgacgtcgctgggtctagtccagttgacgcgcaagcggctcggcaccggt
ctggtggaggcgttctcgaccccgtgcacacactgcagcgggcgcggaatcgtgctgcac
ggcgacccggtcgactcgacgtcgagcagcggacgcaagtccgacgccggcggtcggcgc
ggcaagcgcggaaaacgcggcgccaagtccgacgacgtcgccgtggccaaggtcccgccg
catcccgcgggcgagcacccgatgttcaaggcgatggcggcggccaacggtcgccatgac
gcagacgacgatgccgctgacgaagacaccaccgacgatgagcgccgcgatcagaagccc
gaggaggtcgccgagaccgattccgaagccatccgcaccgcggtgatcgagtcgggcgag
gacgatatcgaggaccttgaggatgaggacttcgacgagaccgactccgatgaggacgac
gaggacgacgagtccgacgacgattccgacgaggacgaggacgagatcgacctggactcc
gatgacgacgaagacgatatcgacgacgacatcgaggtcatcggcgccgacgactccgac
gacgactctgatgaggacgacgacgaggacaccgacgacgaggattcggacgaggacgag
gactccggcgactacgacaccaggggggccgcatctgcggctgtctcgcgagggcggcac
cggcgtcgcgcggccgcccggcctgcgggcccgccaaccaacgagcgctga
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