Mycolicibacterium flavescens: NCTC10271_03059
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Entry
NCTC10271_03059 CDS
T07767
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mflv
Mycolicibacterium flavescens
Brite
KEGG Orthology (KO) [BR:
mflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflv03016
]
NCTC10271_03059 (rnd)
Enzymes [BR:
mflv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NCTC10271_03059 (rnd)
Transfer RNA biogenesis [BR:
mflv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC10271_03059 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
VEG42673
LinkDB
All DBs
Position
1:3183753..3185051
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AA seq
432 aa
AA seq
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MPDPDEAIPQAAAPEEAEPEATPLLVPRDGVPALSTSVSEIRKAAELLAAGHGPFAVDAE
RASGFRYSNRAYLVQIRRDGAGTVLIDPVSHGADPVEALAPVAEVLATDEWVLHAADQDL
PCLAELGIRPVRLYDTELAGRLAGYDKVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEW
LNYAALDVEVLVDLRDAVAAVLEEQGKTEWAAQEFEHLRKFEATPTRRDRWRRTSGIHKI
RDARALAAVRELWTTRDHIAQRRDIAPGRILPDSAIINAATTDPDTVEKLTALPIFGGNR
QRRSAKVWLDALARARTTQDLPTSQEPPNGPPPASRWARRKPEAAARLDAVRAALTGVSQ
RVSVPTENLLSPDTVRRLCWDWEPVDDRAKVIEAFLRDAGTRPWQRELTVPPLAEALTKA
DAALAEQGSAGG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcccgacgaggccatcccgcaggcggccgcgcccgaagaggccgagccggag
gcgacgccgctgctggtgccccgcgacggcgtgcccgcgctgtcgaccagtgtcagtgag
atccgcaaggccgccgagttgctggccgccggccacggcccgttcgcggtcgacgccgag
cgcgcctcggggttccgctactccaaccgtgcctacctcgtccagatccgacgcgacggc
gccggcaccgtgttgatcgacccggtgagccacggcgccgatccggtcgaagcgctggcc
cccgtggcagaggtgctggccaccgacgaatgggtactgcacgccgccgaccaggatctg
ccgtgtctggccgaactcggcatccggccggtccgcctgtacgacacggagctggcgggc
cgactcgccggctacgacaaggtcaacctcgccgcgatggtgcagcggctgctgggcctg
cagctcatgaagggccacggcgccgccgactggtccaagcggccgctgcccgacgaatgg
ctcaactacgccgctctcgatgtggaggtgctcgtcgacctgcgcgacgcggtggccgcg
gtactcgaggagcagggcaaaaccgagtgggcggcacaggaattcgagcacctcaggaag
ttcgaggcgacaccgacccgccgggaccgctggcgacgcacgtcgggcatccacaagatc
cgcgacgcccgcgcgctggccgccgtgcgcgaactgtggaccacccgtgaccacatcgcg
cagcgccgcgacatcgcgccgggccggatcctgccggactcggcgatcatcaacgccgcc
accaccgaccccgacaccgtcgaaaagttgacggcgctgccgatattcggcggcaaccgg
cagcgccgcagcgccaaggtctggctcgacgcgctcgcccgggcccgcaccacgcaggac
ctgccgacatcgcaggagccgccgaacggtcctccgcccgcgtcccggtgggccaggcgc
aaacccgaagccgccgcccgactggacgcggtgcgcgccgcgctcaccggtgtgtcgcaa
cgggtttccgtgcccaccgagaatctgctctcccccgataccgtgcgccggttgtgttgg
gactgggagccggtcgacgaccgggcgaaggtgatcgaggcgtttctgcgtgacgcgggc
acgcggccatggcaacgcgagttgacggtgcctccgctggccgaggcgctgaccaaggcc
gacgctgcgcttgccgagcagggatccgccggaggctag
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