Mycolicibacterium flavescens: NCTC10271_03889
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Entry
NCTC10271_03889 CDS
T07767
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mflv
Mycolicibacterium flavescens
Brite
KEGG Orthology (KO) [BR:
mflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflv03032
]
NCTC10271_03889
03400 DNA repair and recombination proteins [BR:
mflv03400
]
NCTC10271_03889
Enzymes [BR:
mflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC10271_03889
DNA replication proteins [BR:
mflv03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10271_03889
DNA repair and recombination proteins [BR:
mflv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10271_03889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
VEG44492
LinkDB
All DBs
Position
1:4010581..4011600
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AA seq
339 aa
AA seq
DB search
MRLRRSVVSGPGLRRVRRGRGFSYEHPDGTPVTDEKTLQRIKDLVIPPAWKKVWICPYPN
GHIQAVGTDAAGRRQYLYHQRWQEERNEEKFDRVLEMSAALPEMRRRIAADLRRRGLHRD
RVLALALHLADLGYFRAGSEQYAEENNSYGIATLLCEHVTLQRDAIEFDFPAKSGVRRTL
LIDDPEAVRSIRALLRRPERTERLLVCRNGSSWIDIHADDLNTRFKELVGDRYTVKDLRT
WHGTVLAAAAFVDADPPVNKTVIKRVESAVMKEVAEELGNTPAVARGSYVDPRVVQGYES
ELTIASAARRAATMKTLAERQEVLDRGTARLIRKVAKGQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcgccgtagcgtcgtcagcggccccggcctgcggagggtgcgtcgcggtcgc
gggttctcctacgaacatcccgacggcaccccggtcaccgacgagaagaccctgcagcgc
atcaaggatctggtcatcccgcccgcctggaagaaggtgtggatctgcccctaccccaac
gggcacatccaggcggtgggcacggatgccgcgggccgacgccagtacctctaccaccag
aggtggcaggaggagcgcaacgaggagaagttcgaccgggtcctggagatgtcggcggcg
ctgcccgagatgcgcaggcgtatcgccgcggacctgcgccgccgcgggctgcaccgcgac
cgggtgctggccctcgcactgcacctggccgatctcggatacttccgggcgggctctgag
cagtacgccgaggagaacaactcgtacggcatcgcgacgctgctctgcgagcacgtgacc
ctgcagcgcgacgccatcgaattcgactttcccgccaagagcggcgtgcggcgcacgctg
ctgatcgacgaccccgaagcggtccgctcgatccgcgcgctgttgcgccgcccggagcgc
accgagcggctgctggtgtgccgcaacggttcgagctggatcgacattcacgccgacgac
ctgaacacgcggttcaaggagctcgttggggatcggtacacggtcaaggacctgcggacc
tggcacggcaccgtgctggcggcggccgcgttcgtcgatgccgacccgccggtcaacaag
actgtgatcaagcgcgtcgagtccgcggtgatgaaggaagtcgccgaggaactcggcaac
acacccgcggtggcccgaggttcctacgtcgacccccgagtcgtgcagggctacgagtcc
gagctcaccatcgcctcggccgcccggcgcgccgcgacgatgaagaccctggccgaacgg
caggaggtgcttgaccgcggcacggcccgactcatccgcaaagttgccaaaggtcagtaa
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