Mycolicibacterium flavescens: NCTC10271_04152
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Entry
NCTC10271_04152 CDS
T07767
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mflv
Mycolicibacterium flavescens
Pathway
mflv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mflv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10271_04152 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflv03021
]
NCTC10271_04152 (rpoC)
03400 DNA repair and recombination proteins [BR:
mflv03400
]
NCTC10271_04152 (rpoC)
Enzymes [BR:
mflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10271_04152 (rpoC)
Transcription machinery [BR:
mflv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10271_04152 (rpoC)
DNA repair and recombination proteins [BR:
mflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10271_04152 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VEG45169
LinkDB
All DBs
Position
1:complement(4270291..4274247)
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDEMRHNELSTLEAEMAVERKAVEDQRDLDLAERSQKLEAD
LAELEKEGAKSDVRRKVRDGGEREMRQIRDRAQRELDRLEEIWTTFTKLAPKQLVVDEVL
YRELQDRYGEYFTGAMGAEAIKKLIENFDIEAEAEELREVIRSGKGQKKLRALKRLKVVA
AFQQSSNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFYLTTMIEGDAGEYT
PAAKDQPETGVYSSPAEAIMAMDRGALSVRAKIRVRLTQLRPSADLEAELFPEGWKPGDA
WTAETTLGRVMFNELLPHGYPFVNEQMHKKVQARIVNDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPQKQEILDRYEKEADQIEKKYQRGALNHDERNDALVKIWQDA
TEEVGEALRAHYPKDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCETERGINVTL
AELQGSGKDAALVRDQHIETSAYARTLATDAVDKDGNVVVERGHDLGDPAIEALLAAGIT
EVKVRSVLTCATGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQG
GVGEDITGGLPRVQELFEARIPRNKAPIADVTGRVQLEEGERFYKITIVPDDGGEEVVYD
KLSRRQRLKVFKHDDGTERLLADGDHVEVGQQLMEGAADPHEVLRVQGPREVQIHLVKEV
QEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLTERGEFETENRRVVAEGG
EPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLI
PAGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgtatcggtctcgcgaccgcggacgacatc
cgcaactggtcattcggcgaggtcaagaagcccgagaccatcaactaccgcacgctgaag
ccggagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagttggccgcaccc
gtaacgcacatctggtacttcaagggtgtgccttcgcggctgggctatctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtcatcaccgccgtcgac
gacgagatgcgccacaacgagctgtccacgctggaagccgaaatggccgtggagcgcaag
gccgttgaggatcagcgcgatctcgatctggccgagcggtcccagaagctcgaggccgac
ctggccgagctggagaaggaaggcgccaagagcgacgtgcgccgcaaggtgcgcgacggt
ggcgagcgcgagatgcgtcagatccgcgaccgggcccagcgcgagctggaccggctcgag
gagatctggaccaccttcaccaagctggcgcccaagcagctcgtcgtcgatgaggtgctc
taccgggaactgcaggaccgttacggcgagtacttcaccggtgcgatgggcgccgaggcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgaggagctgcgcgaggtc
atccgaagtggcaaggggcagaagaagctccgtgcgctgaagcggctcaaggtggtcgcg
gcgttccagcagtcgagcaactcgccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgcccgatggtgcagctcgatggtggccggttcgcgacgtcggacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcgactgatcgatctc
ggcgcgccggagatcatcgtcaacaacgagaagcgcatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtccgctcaag
tcgctgtcggatctgttgaagggcaagcagggtcggttccgccagaacctgctcggtaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggctctggagctgttcaagccgttcgtgatgaagcgtctg
gtggatctcaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtcagcgt
ccgcaggtgtgggatgtcctcgaagaggtcatcgccgagcatccggttctgctgaaccgt
gcgccgacgctgcaccgcctcggtattcaggccttcgagccgcagctggtggagggcaag
gccattcagctgcacccgttggtctgcgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcaccttccgctgtcggcggaggcgcaggccgaggcacgcatcctgatgctg
tcgtcgaacaacatcctgtccccggcgtcgggtcggccgttggccatgccgcgtctggac
atggtgaccggcctgttctacctgacgacgatgatcgagggcgatgccggcgagtacacg
cctgccgccaaggatcagccggagaccggtgtgtacagctcgcccgccgaggccatcatg
gcgatggaccgcggtgcgctgtcggtgcgggccaagatccgcgtgcggttgacgcagctg
cgtccgtccgccgatctggaagccgagctgtttccggagggctggaagccgggcgacgcc
tggaccgcggaaaccacgctgggccgggtgatgttcaacgagcttctgccgcacggctat
ccgttcgtcaacgagcagatgcacaagaaggtccaggcgcggatcgtcaacgatctcgcc
gagcgctaccccatgatcgtggtcgcgcagaccgtggacaagctcaaggacgccggcttc
tactgggccacccgttcgggtgtcactgtgtcgatggccgatgtgttggtgccaccgcag
aagcaggagatcctggaccgctacgagaaggaagccgaccagatcgagaagaagtaccag
cgcggtgctctcaaccacgacgagcgcaacgacgcactggtcaagatctggcaggacgcc
accgaagaggtcggcgaggcgctgcgggcgcactacccgaaggacaacccgatcatcacg
atcgtcgactcgggtgccacgggtaacttcacgcagaccaggaccctggccggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgtccgatcaagtcctcgttccgc
gagggcctgacggtgctggagtacttcatcaacacccacggtgcccgaaagggcctggcg
gacaccgctcttcgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtgagc
caagacgtcatcgttcgcgagaccgactgcgagaccgagcgcggcatcaacgtcacgctg
gccgagctgcagggctccggaaaagacgcagccttggtgcgcgatcagcacatcgagacg
tcggcctacgcgcggacgctggccaccgacgccgtcgacaaggacggcaacgtggtcgtc
gagcgcggtcacgacctgggcgacccggcgatcgaggcgctgctggccgcgggcatcacc
gaggtgaaggtccgctccgtgctgacctgtgccacgggcaccggcgtgtgcgcgatgtgt
tacggccgctcgatggcgacgggcaagctcgtcgacatcggtgaggccgtcggcatcgtc
gccgcgcagtccatcggcgagcccggcacgcagctgaccatgcgcacgttccaccagggc
ggcgtcggtgaggacatcactggtggtctgcctcgcgtgcaggagctgttcgaggcccgc
atcccgcggaacaaggcgccgatcgccgacgtcaccggccgggtgcaactcgaggagggc
gagcgcttctacaagatcaccatcgttcccgacgatggcggcgaagaagtggtgtacgac
aagctctcccgtcgtcagcgcctgaaggtgttcaagcacgacgacggcaccgagcgcctg
ctcgccgacggcgaccacgtcgaggtggggcagcagctgatggaaggtgctgccgacccg
cacgaggtgctgcgtgtccagggcccccgcgaggtgcagatccacctcgtcaaggaggtc
caggaggtctaccgcgctcagggcgtgtcgatccacgacaagcacatcgaggtcatcgtc
cggcagatgctgcgtcgcgtcacgatcatcgactcgggcagcacggagttcctgcccggc
tcgctgaccgaacgtggcgagttcgagaccgagaaccgtcgggtggtcgccgagggcggc
gagcccgcggccggtcgtccggtgctgatgggtatcacgaaggcgtcgctggccaccgat
tcgtggctgtcggcggcgtcgttccaggagaccacccgcgtgctcaccgatgcggcgatc
aactgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatc
ccggccggtaccggtatcaaccgctaccgcaacatccaggtgcagccgaccgaagaagcc
cgcgctgcggcgtacacgatcccgtcttacgaggatcagtactacagcccggacttcggc
caggccaccggtgccgcggtgccgttggacgactacggctacagcgactatcggtag
DBGET
integrated database retrieval system
