Mycoplasmopsis fermentans M64: MfeM64YM_0302
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Entry
MfeM64YM_0302 CDS
T01402
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mfm
Mycoplasmopsis fermentans M64
Pathway
mfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MfeM64YM_0302 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfm03400
]
MfeM64YM_0302 (uvrB)
DNA repair and recombination proteins [BR:
mfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MfeM64YM_0302 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MfeM64YM_0302 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA
AAA_30
AAA_22
AAA_7
Glyco_trans_4_3
DPPIV_rep
Helicase_C_2
CSN7a_helixI
UB2H
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADV34306
UniProt:
A0AB32XBT9
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All DBs
Position
313312..315321
Genome browser
AA seq
669 aa
AA seq
DB search
MSIFKLISPYKPAGDQPEAIKELVENIKDNMQHQVLKGVTGSGKTFTIANVIKEFDRPVL
VLSHNKTLASQLYSELKGFFPHNRVEYYVSYFDYYRPEAYIPSSDTYIDKQSQNNKDLDA
MRMSAMNAVLTRNDTIIVASVSAIYGALNPSEYYASVFPIEVGMQIKRQEFFKKLVQRNY
KRNQIDLELGTFSAKGDAVYIQPADSDEYQIRVDFFGDEIDSIATCDPITKEVIERFSHY
TIFPGDAYTVDRSVIDEACDKILVELDERIKYFKANNQLIEAQRIQERVEKDVDSLREFG
MCPGIENYARYMDRREAGERPYTLLDYFKGKKPLLFIDESHMMIPQLNGMYHGDYSRKKN
LVDYGFRLPSALDNRPLLFKEFENEFDFQTVYISATPDDYELDKTHGLLTKLFVRPTGLL
DPKIEIRLSKNQIEDIYDELQRQKDKNERTLILTTTKRLAEELSRYFLEKNEKIAYIHSE
HNTFERNEILRKLRKGVYDTVIGINLLREGVDLPEVSLIMVLDADKEGFMRSTKSLIQIS
GRAARNANGRVIFYADKTTKSMQECIEDNEIKRKMQIAYNKKHNITPKTIIKPIAEPIHG
EGIEGEIEFFFKNEKRNQTQSGKKAKEELIKRLREQMNQAAKELDYERAIELRDIILELQ
AGKDKKVEE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttaaattaatttcaccttataaacctgcaggtgatcaacctgaagcaatt
aaagaacttgtagaaaatattaaagacaatatgcaacatcaagtgcttaaaggagttact
ggtagtggtaaaacttttactattgcaaatgttattaaagaatttgatcgccctgtttta
gttttaagtcacaacaaaactttagcttctcaactttacagtgagttgaaaggtttcttt
cctcataatcgcgttgagtattatgtttcatattttgactactatcgacccgaagcttat
attccttcttcagatacttacattgataaacaatctcaaaataacaaagatttagatgct
atgagaatgtcagctatgaatgctgttttaactagaaatgacactattattgttgcttca
gtttcggcaatttatggtgcacttaatcctagtgaatattatgcttcagtttttcctatt
gaagtaggtatgcaaattaaaaggcaagaattctttaaaaaacttgttcaaagaaactat
aaaagaaaccaaattgatttagaattaggcacttttagcgccaaaggtgatgcagtttat
attcaaccagctgatagtgatgaatatcaaattcgagtcgatttttttggcgatgaaatt
gattcaattgcaacttgcgatcctattactaaagaagtaatagaacgttttagtcattac
acaattttccccggagatgcttatacagttgatagaagtgttattgatgaagcttgtgac
aaaatcttagttgaattagatgagagaattaaatattttaaagctaataaccaattaatt
gaagctcaaagaatccaagaaagagttgaaaaagatgtcgatagcttaagagaatttggt
atgtgtcctggtattgaaaactatgcaagatatatggatagaagagaagcaggcgagcgt
ccttataccttattagactattttaaaggcaaaaaaccacttttatttattgatgagagt
cacatgatgattccacaattaaatggaatgtatcatggtgactactcacgtaaaaaaaac
ttagttgattatggttttagattaccaagtgcactagataatagaccactgctttttaaa
gaatttgaaaatgaatttgattttcaaactgtttatatttcagctacccctgatgattat
gaacttgataaaactcatggtttattaaccaaattatttgttcgtcctactggtctttta
gatcctaaaattgaaattagactttctaaaaaccaaattgaagatatttatgatgaattg
caaagacaaaaagataaaaatgaaagaactttgattttaactacaactaaacgtttagct
gaagaattaagtagatactttttagaaaaaaatgaaaaaattgcttatatccactcagaa
cataatacttttgaacggaatgaaatcttaagaaaacttcgtaaaggcgtttacgacact
gttattggaattaacttattgcgtgaaggtgttgatttacctgaagtaagtttaattatg
gttttagatgctgataaagaaggctttatgcgttcgactaaaagcttaatccaaatttca
ggtcgggcagctagaaatgctaatggtcgagtaattttctatgcagataaaactactaaa
agtatgcaagagtgtattgaagataatgaaattaaaagaaagatgcagattgcttataat
aagaaacataatattacacctaaaaccattattaaaccaattgctgagccaattcatggc
gaaggaattgaaggcgaaattgaattctttttcaaaaacgaaaaacgaaatcaaactcaa
agtggcaagaaagctaaagaagaacttattaaaagattacgtgaacaaatgaatcaagca
gctaaagaattggactatgaaagagctattgaattgcgcgatattatcctagaattacaa
gctggtaaagataagaaagttgaggaataa
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