Mycoplasmopsis fermentans M64: MfeM64YM_0306
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Entry
MfeM64YM_0306 CDS
T01402
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mfm
Mycoplasmopsis fermentans M64
Pathway
mfm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MfeM64YM_0306 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfm03021
]
MfeM64YM_0306 (rpoC)
03400 DNA repair and recombination proteins [BR:
mfm03400
]
MfeM64YM_0306 (rpoC)
Enzymes [BR:
mfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MfeM64YM_0306 (rpoC)
Transcription machinery [BR:
mfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MfeM64YM_0306 (rpoC)
DNA repair and recombination proteins [BR:
mfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MfeM64YM_0306 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ADV34310
UniProt:
A0AB32XB60
LinkDB
All DBs
Position
322585..327060
Genome browser
AA seq
1491 aa
AA seq
DB search
MSNFIDKNKLNKDREIEKITLSLATKDDVLQWSNGEVTKPETINYKSYKPERDGLFDELI
FGPTTDHKCPVCGTKYKRSDEGTQCSKTPLCEKSKATILAKISRRSRMGHIHLQNPVVHF
WFFKIDHSIISKLLGLRVAKSSKTVSKTDLEKLIYYKSHIVLESGGIKALQKNAIIDIAE
AAVIYRDALLEIRSKYSEESEEYEIINESLEELESYATSKMGKDYGIDFYEYNEIIHEYS
DAIISTGSKAIEYLLEHVDLQKEAQLIEDEIKKINRSIKDKNHTGTRGQERSKLYKRLAV
INAFINSGQDPKSMLIYDLPVIPADLRPLVQLDGGRHSTSDINELYRRIIIRNNRLKKWE
ETDAPMLIKQNEYRMIQEAVDSLIDNARKKPNPVTSKDSRPLKSISDALTGKKGRFRQNL
LGKRVDYSGRSVIVVGPELKMHQVGIPREMAAKLFEPWIIKELIKGDNQINSIKAGKKAV
ENLDPIIWPYVEKAIQGRPVLLNRAPTLHRLSIQAYEPVLIRGKAIKLHPLSCTPFNADF
DGDQMAVHVPISDEAVREAKELMLASRNILGPKDGEPIINPGQDIILGLYYLTQEATDDK
VIGEGRYFGSYDEMMTAYENKLVSLHARVVLPISEINKRVIPADGQDRYIVSTVGKFIFN
SIFPDSFEFIFGKYVERNIKEVDGKKVISEKEVLHTSGDKNQLKNYLLPYGMNFPEIIKN
MPLNLPLGKKDIAKIVRRIFDRYVAIVTMEDLAAIISDLNSETINNLFDNCANLVDYNKN
TIPVWHTENLVRIIKEEYEKINEELMIEYRKVDQEIGWRVSDYTKMLERVWFRYTNFVAD
VLDKLKALGYHYSTISGTTISISDVTTLPSTKDKIKEGDKYIEQLRDYFEQGLLTDDERY
ALTIQKWAEIKDSIEKDLKEVTKTDPDNPLFMMFTSGARGNSSNFVQLAGMRGLMNNNTK
ILKADAENERVVRSTVEIPVKSSFLDGLTAYEFYSSTHGARKGLTDTALNTAKSGYLTRR
LVDVAQGIVVREDDCGTDYGFEVKDILDTKTNTIIESLGERIEGRFSNVPIYHPRTKEMI
LDADQLITPQIAEEIVKAGIKSVEIRSVLSCYTKNGVCKKCYGKDLALNRVVNIGEAVGV
VAAQSIGEPGTQLTMRTFHTGGVAGVEDITGGFGRLMELIDAYDSPWGKPAVIAEHYGKI
TKIEDKKDTLGNASDYQAITLEYEDEEGNTQSKIYAARKDRRLRVKKGDKVIPGQKIVEG
PIILNELLKVADTRSVQNYLLKEVQRLYRLQGITISDKYIEIIIRQMLSKIVITDPGDSK
FFSGNLVDIFAYQRESARLISQGKKPPFGEVKIKGAKQTPLLSDSFLAAASYQETPKILV
NASIAAQSDKLEGLKENIILGHKIPAGTNCNFEEKGKYDIRDPRSYFQSKFAENSDFPNP
NFEDNLNNLQSQLDEFNSVDPEELAIEEEMGIEEVYEDDYYSDLDENNDNN
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactttatagacaaaaacaagttaaataaagatcgtgaaattgaaaaaattact
ctttctttagctactaaagatgacgttcttcaatgatcaaatggtgaagtaactaaacca
gaaacaattaactataaaagttacaaaccagaacgagatggtctttttgatgaattaatt
tttggaccaacaactgaccacaaatgtcctgtttgtggtactaaatataaaagaagtgat
gaaggaactcaatgttcaaaaactcctttatgtgaaaaatcaaaggctacaattttagct
aaaatttcacgtcgtagccgtatgggtcacattcatttacaaaatcctgttgttcacttt
tgattcttcaaaattgatcactcaattatttctaaattacttggtttaagagttgcaaaa
agttctaaaacagtttcaaaaacagatttagaaaaacttatttactacaaaagccacatt
gttttagaaagtggtggcattaaagctcttcaaaagaatgcaattattgatattgctgaa
gctgcagttatttatcgtgatgctttacttgaaattagaagcaaatattctgaagaatca
gaagaatatgaaattattaatgaatcactagaagaattagaatcatatgcaactagtaaa
atgggtaaagattatggtatcgacttctatgaatacaatgaaattattcacgaatacagt
gatgctattatctcaacaggttctaaagctattgaatacttattagaacatgttgactta
caaaaagaagctcaattaattgaagatgaaattaagaaaatcaatcgttcaattaaagat
aaaaatcacacaggcacaagaggtcaagaacgttcaaaactttacaaacgtctagctgta
attaatgccttcattaactcaggtcaagatccaaaaagcatgcttatttatgatcttcca
gttattccagctgacttacgtccacttgttcaattagatggtggccgtcactcaactagt
gatattaatgagctttatcgtcgtattattattagaaacaatcgtcttaaaaaatgagaa
gaaaccgatgctcctatgcttattaagcaaaatgaatatcgtatgattcaagaagcggtt
gactcattaattgataatgcacgtaaaaaaccaaatcctgttacttcaaaagatagccgt
cctcttaaatcaatttcagacgcattaacaggtaaaaaaggtcgttttcgtcaaaactta
cttggtaaacgtgttgactattcaggtcgttcagttattgttgttggaccagaattaaaa
atgcaccaagttggtattcctcgtgaaatggctgctaaattatttgaaccttgaattatt
aaagaattaattaaaggtgacaaccaaattaactcaattaaagctggtaaaaaagctgtt
gaaaatttagatcctattatttgaccttatgttgaaaaagcaattcaaggtcgtccagtg
cttcttaaccgtgcacctacattgcaccgtctttcaattcaagcttatgaacctgtttta
attcgtggtaaagctattaaacttcacccactttcatgtactccatttaatgctgacttt
gatggtgaccaaatggcagtccatgttcctattagtgatgaagcagttagagaagccaaa
gaattgatgctcgcttcaagaaatattcttgggcctaaagatggtgaacctattatcaac
ccaggtcaagatattattttaggtctttattacttaactcaagaagctacagatgataaa
gtaattggcgaaggtcgttattttggatcatatgatgaaatgatgacagcttacgaaaat
aaacttgtttcacttcatgctcgtgttgttttaccaattagtgaaatcaataaaagagtt
attccagctgatggtcaagaccgttacatagtttcaactgttggtaaatttatcttcaac
tcaattttcccagatagctttgaatttatctttggaaaatatgttgaaagaaatattaaa
gaagtggatggcaaaaaagtaatcagtgaaaaagaagtattacacacttcaggtgataaa
aatcaacttaaaaattacttattaccttatggtatgaatttccctgaaattattaaaaac
atgccacttaacttacctttaggtaaaaaagatatagctaaaatagtacgtcgtattttt
gaccgttatgtagctattgttacaatggaagacttagctgctattattagcgacttaaat
agtgaaacaattaacaacttatttgataattgtgctaatttagttgattacaacaaaaac
actattcctgtatgacatacagaaaacttagtacgtataataaaagaagaatacgaaaaa
attaatgaagaattaatgattgaatatcgtaaagttgatcaagaaattggctgaagagtt
agtgattatacaaaaatgcttgaaagagtatgatttagatatacaaactttgtggctgat
gttttagacaaacttaaagctttaggatatcattattcaacaatttcaggtaccactatt
tcaattagtgatgttactactttaccttcaacaaaagacaaaattaaagaaggagacaaa
tatatcgaacaattaagagactactttgaacaaggccttttaactgatgatgaaagatat
gctttaacaattcaaaaatgagccgaaattaaagactcaattgaaaaagacttaaaagaa
gttacaaaaactgatccagataacccattatttatgatgtttacttctggtgctcgtggt
aactcatcaaactttgttcaattagctggtatgcgtggacttatgaataacaacactaaa
attcttaaagctgacgctgaaaatgaacgtgttgttcgttcaactgttgaaattccagtt
aaatcatcattccttgatggtcttacagcttatgaattctattcatcaacccacggtgct
cgtaaaggtcttaccgatacagctcttaacacagctaaatcaggttacttaactcgtcgt
ttagttgatgtggctcaaggtatcgttgttcgtgaagatgattgtggaactgactatggt
ttcgaagttaaagatattcttgatacaaaaacaaatacaattattgaatcacttggtgaa
agaattgaaggtcgtttttcaaacgttcctatttatcatccaagaactaaagaaatgatt
cttgatgcagatcaattaattactcctcaaattgctgaagaaattgttaaagctggtatt
aaatcagttgaaattcgttcagtactttcttgctatactaaaaatggtgtatgtaaaaaa
tgttatggtaaagacttagctcttaaccgtgtagttaacattggtgaagctgtcggagtt
gttgcagctcaatcaattggtgaacctggtacacagcttaccatgcgtacattccatact
ggtggtgttgctggtgttgaagatattactggtggttttggtcgtttaatggaattaatc
gatgcctatgattcaccatgaggtaaaccagctgttattgcagaacactatggcaagatt
acaaaaatagaagataaaaaagatactttaggtaatgctagtgattatcaagctattact
cttgaatatgaagatgaagaaggcaatacacaaagcaaaatttatgctgctcgtaaagat
cgtcgtcttagagttaaaaaaggtgataaagttatccctggacaaaaaattgttgaagga
cctattatccttaatgaattacttaaagttgctgacactcgttcagttcaaaactactta
ttgaaagaagtacaaagactttatcgtcttcaaggtatcacaattagtgataaatatatt
gaaatcattattcgtcaaatgctttcaaaaattgttattactgatccaggagatagtaaa
ttctttagtggtaacttagttgatatctttgcttaccaacgtgaaagtgcacgtttaatt
tcacaaggtaaaaagcctccttttggtgaagttaaaatcaaaggtgcaaaacaaactcct
ttattatcagattcattcttagctgctgcttcataccaagaaactccaaaaattcttgtt
aatgcatctattgctgctcaatcagataaacttgaaggacttaaagaaaacattatttta
ggtcacaaaattcctgctggtacaaactgtaattttgaagaaaaaggtaaatatgacatc
cgtgatccacgttcatatttccaaagtaaatttgcagaaaactcagattttccaaatcca
aactttgaagataacttaaataatttacaaagtcaattagatgaattcaacagtgttgat
cctgaagaattagcaatagaagaagaaatgggaatcgaagaagtttatgaagatgattac
tactcagatttagatgaaaataatgacaacaattaa
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integrated database retrieval system
