Mycoplasmopsis fermentans M64: MfeM64YM_0321
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Entry
MfeM64YM_0321 CDS
T01402
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfm
Mycoplasmopsis fermentans M64
Brite
KEGG Orthology (KO) [BR:
mfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfm03016
]
MfeM64YM_0321 (truB)
Enzymes [BR:
mfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MfeM64YM_0321 (truB)
Transfer RNA biogenesis [BR:
mfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MfeM64YM_0321 (truB)
Prokaryotic type
MfeM64YM_0321 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ADV34325
UniProt:
A0AB32XB74
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All DBs
Position
348402..349253
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AA seq
283 aa
AA seq
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MFYLIKKTKGISSFSCIKTFAKKMNIKKIGHSGTLDPLASGLLLCASEDDTKLIPYISHK
SKTYISKIIFGKHTSTYDSEGEITNTSEVKIKEEDLEKINKWFLNQKSQIPPIYSAKKIN
GVRSYNLARNGQKVELNTQKIEVFNSKILNFDYQKQELTIELEVSFGTYIRSLANDVGIA
FNTYSYMSELERIKIGKLALSNTKNEYEQIEINNLFDLDFYNATDSEIESLKKGQVINAN
KKLKDNKYLLINKTKDQNLILGILELKNNNLKVVKLFGNRLEE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttaattaaaaaaacaaaaggaatttcatcattttcttgtataaaaacattt
gctaaaaaaatgaatattaaaaaaataggacacagcggaacacttgatcccttagcctct
ggcttattgttatgtgctagtgaagatgacacaaaattaataccttatattagccataaa
agtaaaacatatatcagtaaaataatttttggtaaacatacttctacatatgattctgaa
ggtgaaattactaacacttcagaagtcaaaattaaggaagaagatttagaaaaaatcaac
aaatgatttttaaatcaaaaaagccaaatacctcctatttatagtgcaaaaaagataaat
ggtgttcgtagttataatttagctagaaatggccaaaaggttgagttaaacactcaaaaa
atagaagtttttaactcaaaaattttaaattttgattatcaaaaacaagagttaactatt
gagttagaagtttcttttggaacatatattcgttccttagcaaatgatgttggaatagca
ttcaatacttattcctacatgtcagaattagaaagaattaaaataggcaaactagcttta
agtaataccaaaaatgaatatgagcaaattgaaataaataacttatttgatcttgacttt
tataatgcaacagatagtgaaattgaatctcttaaaaaaggtcaagttattaacgctaac
aaaaaattaaaagacaataaatatttattaattaataaaacaaaagatcaaaacctaata
ttaggaattttagaattaaaaaataacaatttaaaagttgttaaattatttggcaaccga
ttagaggagtaa
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