Mycoplasmopsis fermentans M64: MfeM64YM_0413
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Entry
MfeM64YM_0413 CDS
T01402
Symbol
rpoD
Name
(GenBank) Putative RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mfm
Mycoplasmopsis fermentans M64
Brite
KEGG Orthology (KO) [BR:
mfm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MfeM64YM_0413 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfm03021
]
MfeM64YM_0413 (rpoD)
Transcription machinery [BR:
mfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MfeM64YM_0413 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
WHD_MCM8
Motif
Other DBs
NCBI-ProteinID:
ADV34415
UniProt:
A0AB32XBG1
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All DBs
Position
complement(453306..454775)
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AA seq
489 aa
AA seq
DB search
MNKANEIKSIISMIKKHAKSLKKKQISQSEVYDYLDSIKVEIDDESMDEVLGQLFESGLI
LDESDEGDLDDVSLDELDSELEFEEKSKKDENTDEMDVKNKKSDLYDEDLDEDDNYNLVG
SYGDDDESQEYIIEDDYVDSSYDEDDEDEDEEELSSKKKSKKSKNNEDEDSLELESYENE
EINLNDNKVIKDKDLTNKLTETNDIVKWYMRWIGKYGKLLTIEEEKKLAQEMEKGGFRGK
RARDKLIKRNLRLVINNAKKYKNRGLSFIDLISEGNSGIVKAVSKYNVSKGFKFSTYATW
WIRQAITRAVADQARTIRVPVHMVETINKITKIERELQQELGYEPTDEMIAERYGNGYDA
EKVRYIRKINIDPISLDKQIGKENDSSFSDFVKDESVVNPVDYASQEELVETLNSILEKS
LDDDERILICKRFGVGVDENGNKYPIHSLEKLAEERNVSKERIRQIENKILRKLKSSTRK
GRHLKDFIK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaaatgaaattaaatcaataatctcaatgattaaaaaacatgcaaaaagc
ttaaagaaaaaacaaataagtcagtctgaagtttatgattatttagattcaattaaagtt
gaaattgatgatgaatcaatggacgaagttttaggccaactttttgaatcaggcttaatt
cttgatgaaagcgacgagggcgatttagacgatgttagtttagatgaattagactcagaa
ttagaattcgaagaaaaaagcaaaaaagacgaaaacaccgatgaaatggatgttaaaaac
aaaaaaagtgatttatatgacgaagatttagatgaagatgataactacaatttagttggt
tcatatggtgacgatgatgaaagtcaagaatacattattgaagatgactatgttgattca
agttatgatgaagatgacgaagatgaagacgaagaagaattaagcagtaagaaaaaatcg
aaaaaaagtaaaaataatgaagatgaagattcacttgaacttgaatcttatgaaaatgaa
gaaattaaccttaatgataacaaagtaattaaagataaagatttaaccaacaaacttacc
gaaactaatgatattgttaaatgatacatgcgttgaattggtaaatatggaaaactttta
accattgaagaagaaaagaaacttgctcaagaaatggaaaaaggtggctttagaggaaaa
cgtgctagggataaacttatcaaacgtaatttacgtttagttatcaataatgctaaaaaa
tacaaaaatagaggacttagctttattgacttaatctcagaaggtaactcaggtatcgta
aaagcagtttcaaaatataacgtttcaaaaggctttaaattctcaacatatgcaacttga
tgaattcgtcaagcaataactcgcgctgtagctgatcaagctagaactatcagagtacct
gttcacatggttgaaactattaacaaaatcactaaaattgaacgtgaattgcaacaagaa
ttaggttatgaaccaactgatgaaatgattgctgaaagatatggcaatggctatgacgct
gaaaaagttagatacattagaaaaatcaacattgaccctatttctttagacaaacaaatt
ggtaaagaaaatgattcatcatttagtgactttgttaaagatgaaagtgttgttaatcca
gttgattatgcttcacaagaagaattagtggaaacactaaattcaattcttgaaaaatca
cttgatgatgatgaaagaattttaatctgcaaacgtttcggagttggagttgacgaaaat
ggaaataaatacccaattcactcacttgaaaaattagcagaagaaagaaatgtttctaaa
gaaagaattcgtcaaattgaaaacaaaattttaagaaaacttaaaagtagcacacgtaaa
ggacgtcacttgaaagatttcattaaataa
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