Mycoplasmopsis fermentans M64: MfeM64YM_0975
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Entry
MfeM64YM_0975 CDS
T01402
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mfm
Mycoplasmopsis fermentans M64
Pathway
mfm03030
DNA replication
mfm03430
Mismatch repair
mfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MfeM64YM_0975 (holB)
03430 Mismatch repair
MfeM64YM_0975 (holB)
03440 Homologous recombination
MfeM64YM_0975 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfm03032
]
MfeM64YM_0975 (holB)
03400 DNA repair and recombination proteins [BR:
mfm03400
]
MfeM64YM_0975 (holB)
Enzymes [BR:
mfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MfeM64YM_0975 (holB)
DNA replication proteins [BR:
mfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MfeM64YM_0975 (holB)
DNA repair and recombination proteins [BR:
mfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MfeM64YM_0975 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
SiaC
Acyl_transf_1
Motif
Other DBs
NCBI-ProteinID:
ADV34970
UniProt:
A0AB32XD26
LinkDB
All DBs
Position
1013904..1014821
Genome browser
AA seq
305 aa
AA seq
DB search
MVSKNVITILENSIKNNKLSHCYLLKAPSGLNIDDSILYMINKLCNSQLQSLDLETMLPN
VQIFEDNGTENNLKKDKIVAGFEESSLSSFVEGQKKITVFKNVENASKAALNSLLKIIEE
PSDNVVFILTTNNITKVLETIKSRSITININAPSNEELAEELKGENLKEEAIWFYSHIFA
DLTQVKKYTNNESFKLIKDLLEAIEKSIKNPHYLYIFLSRFTKKDSKDTFVFLAMALRFV
FSWVWTADAFCRKNYAKLLVKLKNIKFDLFNCFIVIDDFLKIQNTNANFFLQAEKMLIKL
VESYA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaaaaatgtcataactattttagaaaactcaataaaaaataacaaacttagt
cactgttatttactaaaagctccttcaggtttaaacatcgatgattcaattttatacatg
attaataaactttgcaactcacaattgcaatctttagatcttgaaacaatgctgcctaat
gttcaaatttttgaagataatggcactgaaaataatcttaaaaaagataaaattgtggcc
ggctttgaagaatcaagtttatcttcatttgttgaagggcaaaagaagataactgtattt
aaaaatgttgaaaatgcttctaaagctgctcttaattcattacttaaaataattgaagaa
ccaagtgataatgtagtctttattttaacaactaataacataacaaaagttttagaaacc
atcaaatcaagatcaataacaattaacattaatgcgccttcaaacgaagagttagcagaa
gaattaaaaggtgaaaatttaaaagaagaagctatatgattttatagccatatttttgct
gatttaacacaagtaaaaaaatatacaaataatgaatcatttaaactaattaaagacttg
cttgaagctatagaaaaaagtattaaaaatcctcattatttatatattttcttatctaga
tttacaaaaaaagatagcaaagatacctttgtatttttggctatggctttgcgttttgtt
ttctcttgagtatgaacggctgatgctttttgtagaaaaaattatgctaaattattagtt
aaattaaaaaacataaaatttgacttattcaactgttttatagtaatagacgacttttta
aagattcaaaatacaaatgcaaatttcttcttacaagctgaaaaaatgttaattaaatta
gtggagtcttatgcctaa
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