Mariprofundus ferrinatatus: Ga0123462_0004
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Entry
Ga0123462_0004 CDS
T05213
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mfn
Mariprofundus ferrinatatus
Brite
KEGG Orthology (KO) [BR:
mfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfn03032
]
Ga0123462_0004
03400 DNA repair and recombination proteins [BR:
mfn03400
]
Ga0123462_0004
Enzymes [BR:
mfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ga0123462_0004
DNA replication proteins [BR:
mfn03032
]
Prokaryotic type
DNA Topoisomerases
Ga0123462_0004
DNA repair and recombination proteins [BR:
mfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ga0123462_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
HATPase_c
Toprim
HATPase_c_3
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ATX80884
UniProt:
A0A2K8L7G8
LinkDB
All DBs
Position
3918..6344
Genome browser
AA seq
808 aa
AA seq
DB search
MSAEHPEEYGADSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHC
DKIEVIIHSDDSVTVRDNGRGIPVDMHEEEQRSAAEVIMTVLHAGGKFDSNSYKVSGGLH
GVGVSVVNALSETLELVIRRNGKVYYQKYHLGVPEEPLKEIGTAKGTGTEVRFLPSLEIF
SHRNMSFDILSTRLRELSFLNSGVHIEVHDERSDNKKVVFAYEGGISAFVEHLNRTRTPL
HGQCVAMSAERDDVTVELSMQWTDSYQEHVFCFTNNIPQKDGGTHLAGLRGALTRTVNNY
ATANGLMKKLKVSLTGEDCREGLTAVLSVKVPDPKFSSQTKEKLVSSEVRPIVESVVNEK
LAEWFEENPKEAKRIVGKVSEAATAREAARKARDLTRRKGALDISSLPGKLADCQEKDPA
LSELYLVEGDSAGGSAKQGRDRKAQAILPLKGKILNVEKARFDKMLSSQEIGTMITALGT
GIGKEDFDIAKLRYHKIVIMTDADVDGAHILTLLLTFFYRQMPEVIERGHLYIAQPPLYR
VTRGKKARYIANDDELFEFLLEHGSEGKEYFSYKKAKAMNGDRLQTAVRSINRLQRLQNR
LSQRIDIKVLKFLIESGKTTVKMMRHKDQLEERMDALDYAFRQASRVDETLSWKIMEDAE
DGSYWVQFQRRDHGRVMISRLDKDLVGTAEFAEAQKLCESMQNLVDEGAHLTHGDKSWPI
NHFDELASAIESDGRKGMNIQRYKGLGEMDPEQLWETTMDPQNRVFKRVTLEDVVNADET
FSTLMGDAVEPRRRFIQDNALKVKNLDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagcatccggaggagtatggtgcggatagtattaaggtactgcgagggctt
gatgcggtacgcaaacgtcctggcatgtatatcggtgatactgacgatggaacaggcctg
catcatatggtcttcgaggtggtggataacgccatcgatgaggcactcgccggccactgc
gacaagattgaagtcattatccactccgatgattcggtaaccgttcgcgataacggtcgc
ggaattccggttgatatgcatgaagaggagcagcgttcggctgccgaagtgattatgacc
gtgctgcatgcaggcggaaaattcgacagtaactcatataaggtgtccggcggtctgcat
ggtgtgggcgtatcggtggtgaatgcgctttccgaaacgcttgagctggtcattcgacgc
aacggcaaggtgtactaccagaagtatcacctcggagttcctgaggagccgctcaaggag
atcggaacggccaagggaactggtacggaggtacgtttcctaccgagtctggagatattc
tcccaccgaaacatgtcatttgatattctctccacccgcctgcgtgaactttcttttctc
aacagcggtgtgcatatcgaagtccatgatgaacgcagtgacaacaagaaggtggttttt
gcttatgaaggcggcatctccgcatttgtggagcatctgaatcgaacccgcacgccgctg
catggccagtgcgtagccatgagtgcagaaagagatgatgttactgtagagctctccatg
cagtggaccgactcctatcaggagcacgtcttctgtttcaccaataatattccacagaaa
gatggcggtacgcacctggcaggtcttcgcggcgcactaacccgtactgttaataactat
gctaccgccaatggcctgatgaaaaaactgaaggtgagcctgaccggcgaagattgccgt
gaggggctgactgcagtgctctctgtcaaggttcccgacccgaaattctcatcgcaaacc
aaggagaaactggtctcatctgaagtgcgaccgattgtggaaagtgtcgtgaatgagaaa
ctggccgaatggttcgaggagaatccgaaagaggccaagcgcattgtcggcaaggtctcc
gaagcagcaacggcgagagaagcagcacgcaaagcacgcgacctgacacgccgcaagggt
gcactcgacatctcctcattgccgggcaagctggccgactgtcaggagaaagatcctgct
ctttccgaactctacctggtggagggtgattccgcgggtggttcagcgaagcagggacgt
gaccgtaaggcgcaggcgatcctgccactcaagggtaaaatcctgaatgtggagaaggca
cgattcgataagatgctctcgagtcaggagatcggcaccatgatcactgcacttggcacc
ggaatcgggaaggaagatttcgatatcgccaaactacgttaccacaagatcgtgattatg
accgatgcggatgtggatggtgcgcatattcttaccttgctgcttaccttcttctatcgc
cagatgcctgaagtgatcgagcgcggccacctctatattgcacagccaccgctctatcgc
gtaacacgcggcaagaaggcacgctatatcgccaacgatgatgagctgttcgaattcctg
ctcgagcatggcagtgaagggaaagagtacttcagttataagaaagccaaagcgatgaat
ggtgatcgtctgcagactgccgttcgcagtatcaaccgcctgcagcggcttcagaacagg
ctctcccagcgtatcgatatcaaggtactcaaattcctgatcgaaagtggcaagacgaca
gtcaagatgatgcgccacaaggatcagctggaagagcgtatggatgcactcgattacgcc
ttcagacaggcctcgcgtgttgacgagacgctttcatggaagattatggaagatgccgag
gatggaagctattgggttcagttccagagacgtgaccacggccgcgtgatgatctcccgg
cttgataaggatctggtcggcactgccgaatttgccgaggcgcagaagctatgtgagtcg
atgcagaatctggtggatgagggcgctcaccttacccatggtgacaagagttggccgatt
aaccactttgatgaattggcgagtgcgattgagagtgatggtcgcaaggggatgaacatc
cagcgctacaaaggattgggtgaaatggatccagagcagctgtgggagacaaccatggat
ccgcagaaccgcgtattcaagcgggtaacgcttgaggatgtcgtcaatgccgatgaaact
ttctccaccctgatgggagatgcagttgaaccgcgtcgccgctttatccaggacaatgcg
ctgaaagtgaaaaatctggacgtttaa
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