Mariprofundus ferrinatatus: Ga0123462_0233
Help
Entry
Ga0123462_0233 CDS
T05213
Name
(GenBank) DNA polymerase-3 subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfn
Mariprofundus ferrinatatus
Pathway
mfn03030
DNA replication
mfn03430
Mismatch repair
mfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ga0123462_0233
03430 Mismatch repair
Ga0123462_0233
03440 Homologous recombination
Ga0123462_0233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfn03032
]
Ga0123462_0233
03400 DNA repair and recombination proteins [BR:
mfn03400
]
Ga0123462_0233
Enzymes [BR:
mfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ga0123462_0233
DNA replication proteins [BR:
mfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ga0123462_0233
DNA repair and recombination proteins [BR:
mfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ga0123462_0233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ATX81109
UniProt:
A0A2K8L4E1
LinkDB
All DBs
Position
complement(226261..229752)
Genome browser
AA seq
1163 aa
AA seq
DB search
MHFAPFAHLHNHSDFSLLGATTRVSELLKRVAELKQPAVALTDYGNLFGAIEFYSKAMQM
GIKPILGCEIFLCDDHTKRISEGPRGPRFPQLVLLARNNTGWKNLLKLISISYIEGFYYK
PRVGKPLLAEHCDGLIALSSGWNGEVEQLLQKGDRTGATAAARAYKEMFHENCFFLELQR
HGNGGQEEINRQLIEIAHELDIPLVASNNTHFIERDGFNSFEAMLALQQNRTIHDDVTGI
FTPEHYLKSFEEMQDLFSDIPEALENSMHIANRCNVDLRFGNYQLPDFQPPEDLELNAYM
RKQAQEGLDLRWPTILAGEPEADRDVYDKRLQFELDIIEKMGFPGYFLIVSDFILWAKNH
GIPVGPGRGSGAGSLVAYVLKITDLDPIKYGLLFERFLNPERVSMPDFDIDFCMSRREEV
IRYVTEKYGEAKVAQIITYGSMKAKAVVRDVGRVLGMDLAKVNLIAKLIPNDLKMTLEKA
LVEEPKLAKMVDDDHEVAHLFELARRLEGCHRNAGKHAAGVIIGRQDLDETAPLFKVAGE
EGKVVQWDMGNSEKMGLIKFDFLGLKTLTVIDIACKLIKRYDPRPEAQSFDITAIPMDDQ
ATFNLMQRGQTGAVFQVESSGMRDLLTRLRPDCFEDIIALVALYRPGPLESGMVDTYIEC
KHGRQEIVYLVPQLKEILQETNGVILYQEQVMQIAQVLAGYTLGQADMLRRAMGKKKPEE
MAKQRQIFMKGAEKKKVPLDRAEQIFDLMEKFAGYGFNKSHSAAYALISYQTAYLKAHYP
QAFMAATLSCDMGNTDKVAALVTDCRNMDIEVLPPHINASDWEFRPEEKAIRYGLGAIKG
VGEAAIRAVVAERKENGPFESFEELIMRSPTRTLNKRILEALIKAAALEGLIPNQRAAIE
GLSEVLEQLSRKRKEYASNQSTLFEVAEPQSGEGGFPLLASWSHGEQLQAEREVLGFYLT
GHPLEAYLKRFKGLGDCNLSELRERAHESQIVVPVGISGIRPYNGRSGTMAFVQVEDLHG
QAEMIVFAKLYAEVSELLASDEPLLIAAKVDTSKDDPVLIAEAISSLDDILPELVHEVQI
TAASIAWDEVTLARLKSMATGGSARLAFHVRLPDASLAQLITGPCINWSEAVRTQLDARF
GVDSIRVRCKPWQPPRSQQMRRG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgctccattcgcccatcttcataaccactccgacttctccctgcttggtgcc
accacgagggtaagcgagttgctgaaacgggtggcggaactgaaacagccagccgtagcc
ctgaccgattacggcaacctgttcggcgctatcgagttctactccaaagcgatgcagatg
ggcatcaaaccgattctcggctgcgaaatctttctctgcgatgaccacaccaaacgcata
tctgaggggccgcgcggaccgcgcttcccgcagctggtactgctggcacgcaacaacacc
ggctggaaaaacctgctcaagctgatttccatctcctatatcgaaggtttctactacaag
ccgcgtgtcggcaaaccactgctggccgagcactgtgacggcctgattgccctgtcctcc
ggctggaatggcgaggtggaacagctgctgcagaagggcgaccgtacgggtgccacagct
gcagcgcgcgcctacaaggagatgttccatgagaactgcttcttcctggagctacagcgc
catggcaatggcggccaggaggagattaaccggcaactgatagagatcgcccatgagctt
gatatcccgctggtagccagcaacaacacccatttcattgaacgcgacggtttcaactct
tttgaggcgatgctggcgctccagcagaaccgcacgattcacgatgatgtcaccggcatc
tttacccccgagcactacctcaaatcgttcgaagagatgcaagacctcttttccgacatc
cccgaggcgctggaaaacagcatgcacattgccaaccgctgcaatgtcgacctgcgcttc
ggcaactatcaactgcccgatttccagccgcctgaagatctggagctcaacgcctatatg
cgcaaacaggcgcaggaggggctggatctgcgctggccgacgatccttgccggcgagccg
gaagccgaccgcgatgtctatgacaaacgactgcagttcgaactcgacatcattgagaag
atggggtttccgggatacttcctgatcgtatcggacttcatcctgtgggcaaaaaatcac
ggcatcccggtcggccccggacgaggctcgggcgccggttcactggtcgcctatgtcctg
aaaatcaccgatctggatccgatcaagtacggactacttttcgaacgtttcctcaaccct
gaacgcgtatcgatgcccgatttcgatatcgacttctgcatgagccgccgtgaagaggtg
atccgctacgtcaccgagaagtatggtgaggcgaaagtggcgcagatcatcacctacggg
tcgatgaaggcaaaggctgtggttcgcgatgtcgggcgtgtgctcggcatggatctggcc
aaggtaaacctgatcgccaagctgatccccaacgacctgaagatgacactcgaaaaagca
ctggtcgaggagccgaagctggccaagatggtcgatgatgaccatgaggtagcgcacctc
tttgaactggccagacgccttgaggggtgccaccgcaatgccggcaaacatgccgccggc
gttatcatcggcagacaggacctcgacgaaaccgccccgcttttcaaggtggccggcgaa
gagggaaaggtggtccagtgggacatgggcaacagcgaaaaaatggggctgatcaagttc
gattttctcggactgaaaacgcttaccgttatcgatatcgcctgcaaactgatcaagcgc
tatgacccgcggcccgaagcgcagagcttcgatatcaccgccattccgatggatgatcag
gccacattcaatctgatgcagcgcggccagaccggtgcggtattccaggtggagtcatcg
ggcatgcgcgacctgcttacgcgccttcgccccgactgcttcgaagatatcatcgcgctt
gtggccctctatcgtcccggcccactcgaatcgggcatggtggacacctatatcgagtgc
aagcacggacgccaggagatcgtctatctggtgccgcaactgaaagagattctgcaggag
accaatggcgtcatcctctatcaggagcaggtgatgcagatcgcccaggtactggcaggc
tacacgctcggccaggccgatatgctgcgtcgcgccatgggcaagaaaaaaccggaggag
atggccaagcagcggcagattttcatgaagggggctgaaaagaagaaagtgccgctcgac
agggctgagcagatcttcgacctgatggagaagtttgccggctacggtttcaacaaatca
cactcggcagcctacgccctgatctcctaccagaccgcctacctcaaggcgcattatccc
caggccttcatggccgcaaccctctcctgcgacatgggcaataccgacaaggttgcagcg
ctggtcaccgactgccgcaacatggatatcgaggtgctgccaccgcatatcaacgcatcg
gattgggagttccgccccgaggagaaggcaatccgttacggcctcggcgccatcaaaggt
gttggagaagctgcgatccgtgcagtggtggctgagcgcaaagagaacggaccgttcgaa
tcctttgaagagctgatcatgcgctcaccaacacgcacgctgaacaaaaggatccttgag
gcactgatcaaggccgcggcccttgaggggctgatcccgaaccagcgggctgcgattgaa
ggactgtccgaagtgcttgagcagctctcccgcaaacgcaaggagtacgcctccaaccag
tccacactgtttgaggtggctgaaccgcaatccggagaggggggattcccgctgctggca
tcgtggagtcatggtgagcaactacaggcagagcgtgaggttctcgggttctaccttacc
ggccacccgcttgaggcctacctcaagcgttttaaagggcttggtgactgcaacctctcc
gagttgcgggagcgtgcgcatgagagccagatcgtcgtgccggttggcatttcaggcatc
cggccctacaacgggcgttcgggaaccatggcatttgttcaggttgaagatctgcacggc
caggcggagatgatcgtctttgccaagctctatgccgaggtctcggaactgctcgcttct
gacgaaccgctgctcatcgccgccaaggtggacacctccaaagatgatccggttctgatt
gccgaggcgataagctcgctcgatgacatcctgccggaactggtgcatgaagttcagatc
actgcagccagcattgcctgggatgaggtcacgctggcccgcctgaaatcgatggcgacc
ggaggatcggcaaggcttgcattccatgtacggcttccagacgctagtcttgcgcaattg
atcaccggtccgtgtatcaactggagcgaggcggtccgcacccaactggatgcccgcttc
ggcgtggattcgattcgcgtccgctgtaaaccgtggcagccgccacgcagccagcagatg
cgccggggataa
DBGET
integrated database retrieval system
