Mariprofundus ferrinatatus: Ga0123462_0878
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Entry
Ga0123462_0878 CDS
T05213
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mfn
Mariprofundus ferrinatatus
Brite
KEGG Orthology (KO) [BR:
mfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfn03016
]
Ga0123462_0878
Enzymes [BR:
mfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Ga0123462_0878
Transfer RNA biogenesis [BR:
mfn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Ga0123462_0878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ATX81747
UniProt:
A0A2K8L393
LinkDB
All DBs
Position
894047..894652
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AA seq
201 aa
AA seq
DB search
MRLFAGIELPSNITDQLTLWWESERGYLDPDHWRPVAPHLWHLTLAFYGEVSGGDVDDLA
EELAECSRNAKALTLKTGNFGFFPRASKPRVFWVGVDEAGDGDGLKHLARCCRRAGHATV
RKRTATEAPFRGHITVARVRGHAALPDMEQLQMMADVPVLDWGVQRINLYQSILRPEGPQ
YRRLETFELNGSSNRTRGKYV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtttgccggcattgagttgccatcaaatattacagatcagttaacgctctgg
tgggaatcggagcggggataccttgatcctgatcactggcgcccggtggcgccgcacctg
tggcatttaacactcgctttctacggcgaggtttccggcggtgatgtcgacgatcttgca
gaagagctggctgaatgctcccgaaatgctaaggctttgacattaaaaacaggtaatttc
ggttttttcccaagggcatcaaaaccacgcgttttctgggttggggttgatgaagcaggc
gatggtgatggtctgaaacatcttgcccgttgttgcaggcgggccgggcatgctaccgtt
cgcaaacgcaccgccacggaggcgccgtttcggggccacatcaccgtagccagagtcagg
ggccatgctgctttaccggatatggaacagttgcagatgatggcagatgtgcccgtgctt
gactggggagtgcagaggataaacctttaccagtccattttaaggccggaagggccgcaa
tacaggcggctggaaacatttgaattgaacggttcgagcaatcgaacgaggggaaaatat
gtctga
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