Mariprofundus ferrinatatus: Ga0123462_2248
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Entry
Ga0123462_2248 CDS
T05213
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfn
Mariprofundus ferrinatatus
Brite
KEGG Orthology (KO) [BR:
mfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfn03032
]
Ga0123462_2248
03400 DNA repair and recombination proteins [BR:
mfn03400
]
Ga0123462_2248
Enzymes [BR:
mfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ga0123462_2248
DNA replication proteins [BR:
mfn03032
]
Prokaryotic type
DNA Topoisomerases
Ga0123462_2248
DNA repair and recombination proteins [BR:
mfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ga0123462_2248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Diphthamide_syn
Motif
Other DBs
NCBI-ProteinID:
ATX83082
UniProt:
A0A2K8L7H3
LinkDB
All DBs
Position
complement(2260263..2262563)
Genome browser
AA seq
766 aa
AA seq
DB search
MSAVVVVESPAKAKTIEKYLGKGYKVLASYGHVRAFPKKDGSVDPDNDFAIKYQVIADKK
KRLDAINTAMKKADTLILASDLDREGEAIAWHVAEVLRERGSLKGKTVQRITFNEITKKA
ITEAIANPSEVDMQLVDAQQARSALDYLVGFTLSPLLWRKVRSGLSAGRVQSVALRLICE
REQHIREFKPKEFWTINSECEVADGLFQAQLHAVEDKPLGKFAITDGVNAKVMARRVAKG
DFLVSEVQKKQSKQQPAAPFITTTLQMDASRKLGFTARKTMQVAQKLYEGIEVEGEPVGL
ISYMRTDSVSLSEDAIVEMRDYIGNNYGDSFLPAQPRRFKTKSKNAQEAHEAIRPTSIHR
TPDSLKRVLDSDGLKLYKLIWKRALASQMAPAILDQVRADIESGTGADKLTLRATGSTLA
FPGFRKLYIEGTDEPGKQEQEKLLPPLAAGDAVTIKEAEAKQHFTEPKPRFSEATLVKEL
EADGIGRPSTYASILNVLRERKYVDMEKKRFVPTDTGEHVNDYLLGKLENTISFDDIIDV
KFTANIEDRLDGVARGEQEWKPVLRDFWTPFKAKVDSAMGRPRPAGEMTDEKCPECGKPM
AIKLGKYGKFLACTGYPECKQAKPLNGNGNGEAAEEPELSDQKCEKCGEPMVIKSGRYGK
FLGCSAYPACKNIQPMEKPVDTGIKCTACGKGTFLEKKSRRGKVFYSCSGYPKCKSALWD
KPIDRQCPECQAPFVTEKKTKRRGTEHVCVTEGCGWKEQVELPESA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgttgttgtggtggagtcgcccgccaaagctaaaacgatcgaaaaatacctg
ggaaaaggctacaaagttctggcctcctatggccatgtgcgcgcctttcccaagaaggat
ggttctgtcgacccggacaacgattttgctatcaagtatcaggtgattgccgataagaag
aagcggctggatgccatcaacacggccatgaagaaggccgacacgcttattctcgcaagc
gatttggatcgcgagggagaggcgattgcgtggcatgttgccgaggtgctcagggagcgc
ggcagcctgaaaggtaaaacggtacagcgcattaccttcaatgagattaccaagaaggcg
attaccgaggccattgcgaacccatcggaggtggacatgcagctggtcgatgcccagcag
gcccgaagtgcgcttgactatctcgtggggtttacgctttcgccgctgctgtggcgcaag
gtgcgcagcggcctctctgccggccgcgttcagtcagtcgcgctgcgcctgatctgtgag
cgcgaacagcatattcgcgaattcaaaccgaaagagttctggactatcaattccgaatgc
gaggtcgctgatggcctttttcaggcccagttgcatgcggtcgaagataaaccgttaggc
aaatttgctattaccgacggtgttaatgcgaaggtgatggcgcgacgggtggcaaaaggc
gactttctcgtttcagaggtgcagaagaagcagagcaagcagcagccggccgccccgttt
atcaccaccactttacagatggatgcctcccgcaagctgggctttacagccaggaaaacg
atgcaggtggcgcagaagctttatgaaggtatcgaggtggaaggagagcctgtcggcctg
atcagctacatgcgaaccgactccgtctccctctctgaagatgccattgtcgagatgcgc
gactatatcggcaacaactacggtgacagttttctgcctgctcagcctcgccgttttaag
accaagagcaaaaacgcgcaggaggcccatgaggcgattcgccctacctctatccatcgc
acgccggattcactgaaacgcgtactcgatagcgatggtctgaagctttataagctgatc
tggaaacgtgcgctggcctcgcagatggcgcccgccattctcgaccaggtgcgtgctgac
attgagtcgggcacaggcgcggacaagcttacgctgcgcgctacaggctctacgctggca
tttccgggtttccgtaagctctatattgagggcactgatgagccgggcaagcaggagcag
gagaagttgctgccaccgctggctgccggtgatgccgtaacgattaaagaggcggaggca
aagcagcatttcaccgagcccaagccgcggttctccgaggcgacgctggtcaaggagctg
gaagcggacggcatcggtcgcccctccacctatgcatcgatcctcaacgttctgagggag
cggaaatatgtcgatatggagaagaagcgctttgtgccgaccgataccggcgagcatgtg
aacgactaccttcttggcaagctcgaaaacacgatcagtttcgatgatatcatagacgta
aagttcactgccaatatcgaggacagacttgatggcgtggcgcgtggtgagcaggagtgg
aagcctgtattgcgagacttctggactccattcaaggccaaggtggacagcgccatgggg
cgccctaggcccgcaggtgagatgaccgacgagaagtgtcccgagtgcggcaagccgatg
gcaatcaagctgggtaaatatggcaagttcctggcctgtaccggttatcccgagtgcaaa
caggccaagccgctcaatggaaatggtaacggcgaggcagcagaggagcccgaactttcc
gaccagaagtgtgaaaagtgcggtgaaccgatggtaatcaagagtggccgctacggtaaa
ttcctcggttgttctgcttatccggcgtgcaagaatatccagcctatggagaagccggtg
gataccggcatcaaatgtacagcgtgcggcaagggcaccttcctggagaagaagtcgcgt
cgcggcaaggttttctactcatgttcgggttatccgaaatgcaagagtgcgctgtgggat
aaaccgatcgacagacagtgccccgagtgtcaggcgccgtttgtaacagagaagaagacc
aagcgccgtggtaccgaacatgtctgtgtcacggaaggttgcggctggaaagagcaggtg
gagttacctgaatctgcctga
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