Methanoregula formicica: Metfor_0228
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Entry
Metfor_0228 CDS
T02392
Name
(GenBank) acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mfo
Methanoregula formicica
Pathway
mfo00061
Fatty acid biosynthesis
mfo00071
Fatty acid degradation
mfo01100
Metabolic pathways
mfo01212
Fatty acid metabolism
mfo02024
Quorum sensing
mfo04146
Peroxisome
Module
mfo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Metfor_0228
00071 Fatty acid degradation
Metfor_0228
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Metfor_0228
09145 Cellular community - prokaryotes
02024 Quorum sensing
Metfor_0228
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mfo01004
]
Metfor_0228
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfo04147
]
Metfor_0228
Enzymes [BR:
mfo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Metfor_0228
Lipid biosynthesis proteins [BR:
mfo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Metfor_0228
Exosome [BR:
mfo04147
]
Exosomal proteins
Exosomal proteins of breast milk
Metfor_0228
Exosomal proteins of breast cancer cells
Metfor_0228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AGB01309
UniProt:
L0HDZ3
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All DBs
Position
221717..223258
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AA seq
513 aa
AA seq
DB search
MSNVTTLLDAKSVPEAKAALICPSRNETYSYKMLRDEMNRVGAGLRSLGIRKSDRVCIYL
DSSPEYLISYFAIWRIGAVAVPTNIVYRGEELLHVLNDAGAIAVITDRQDAPVIAGIRKN
APNLVHVICIGGACDGTVAWESFPPAPANMRAENCSTEDICHIQYTAGTTGRPKGAMLTH
GNWMTALDTERDALRLRPVDTYLGIYPMGHVGLSWGLSVIRAGGTYVMMERFDLERYLSL
ASLYEVTILAGMPPVIHSLVHAAPGTEERLRHARVMISGGGGLLPSVWEAFDKRYHIPVA
NSYGLSETIVIGSGTTTLPEYPHLTKNFTSVGVAVGYTEIKIVDTGDPEKELPHGESGEI
ALRGPAVAKGYWNLPDATRDVFRPDGWFLTGDIGNLDADGILCITDRKKDMIIMSGWKIY
PTEVENVIVRHPAVADVAVFGVPDERKGEFAVAAVVLRPGMSLGQAEFDVFCRERVAGYK
VPRKLLIVESLPRVHGWKLLRRDLRQKFGGSGV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgttaccactctcctggatgcaaagagcgttcccgaagccaaggctgcactc
atctgcccgtcgcggaacgagacgtacagctacaagatgttacgggacgagatgaaccgg
gtcggcgcaggcctccgctcgctcgggatcaggaaaagcgaccgggtctgcatctacctt
gacagttcccccgaatacctgatcagctactttgcgatctggaggattggtgctgttgca
gtaccgactaatatcgtttatcgcggggaagagctcctgcatgtcctgaatgatgccggt
gcaatcgcggtcatcacggaccggcaggatgccccggtcattgccgggatacggaagaac
gcacccaaccttgtccatgtcatctgtatcgggggagcctgcgatggcacggttgcctgg
gagtcattcccccccgcccccgcgaacatgcgggccgagaactgctcgacagaggatatc
tgccatatccagtacacagccgggacaaccggaaggccgaaaggtgcgatgctcacgcat
ggcaactggatgactgcactcgatacggaacgggacgcgctccggctccgcccggttgat
acctaccttggcatctatcccatggggcatgtcgggctctcgtggggtctttcggtgata
cgggccggcggcacctatgtcatgatggagcggttcgatctcgaacggtatctctctctt
gcgtcattgtacgaggtgacgattcttgccggcatgcccccggtcatccattcgctcgtc
catgcagcgcccgggaccgaggagcggctccgccatgcccgcgtgatgatctcagggggc
ggggggctcctcccctctgtctgggaagcatttgacaagcgctaccatatcccggttgca
aactcctacgggctctccgagacgattgtcatcggttccgggacaacaacgctgcccgag
tatccccaccttaccaagaattttacgagtgtcggcgtcgcggtcgggtacacggagatc
aagatcgtggatacgggtgatccggagaaagaactgccgcacggcgagagcggggagatc
gcccttcgcgggcctgccgttgcgaaggggtactggaacctgcccgatgctacaagggat
gtgttccggccggacggctggttcctgaccggcgacatcggaaacctggacgcagacggg
atcctctgcatcaccgaccggaaaaaggacatgatcatcatgtcgggctggaagatttac
ccgactgaggtagagaacgtgatcgtccgtcacccggccgttgcggatgtcgcggtcttc
ggtgtaccggatgaacggaaaggggagtttgcggttgcagcagttgttctccggcccggg
atgagcctgggccaggcagagttcgatgtcttttgccgggaacgcgtggcagggtacaag
gtcccgcggaaactgctgatcgttgaatcgctcccgcgggtccacggctggaaactcctg
aggagggacctccggcaaaagttcggcggatcgggcgtataa
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