Methanoregula formicica: Metfor_0346
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Entry
Metfor_0346 CDS
T02392
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
mfo
Methanoregula formicica
Pathway
mfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Metfor_0346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfo03021
]
Metfor_0346
Transcription machinery [BR:
mfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Metfor_0346
Prokaryotic type
Archaeal type
TFB
Metfor_0346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Trm112p
Lar_restr_allev
Zn_ribbon_LysW
HTH_AsnC-type
Ribosomal_S27e
Zn_ribbon_IS1595
UPF0253
Stc1
A2L_zn_ribbon
Zn_ribbon_SprT
LUC7
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-ProteinID:
AGB01421
UniProt:
L0HC85
LinkDB
All DBs
Position
complement(339051..340061)
Genome browser
AA seq
336 aa
AA seq
DB search
MWMQEIEKLKVLQSEREALKARTKQKEQEKKAENHTETVCPECGGRQLVHDYERAELVCQ
SCGLVIDDDFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRAI
SSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDAV
DKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLKL
LPTSPIDYVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGG
ERRTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgcaggaaatcgagaaacttaaagtcctccagtccgagcgtgaagcgctcaag
gcgaggacgaaacagaaagagcaggagaagaaagccgagaaccacacggaaaccgtgtgc
cccgagtgtggcggcaggcagcttgtccacgactacgaacgtgcagaacttgtctgccag
agctgcgggcttgtcatcgatgacgacttcatcgaccgcggcccggagtggcgtgcattc
gaccacgaccagagaatgaagaggtcacgtgtcggtgcaccgatgaccttcacgatccac
gataaaggtctctcgaccatgatcgactggcgcaaccgtgactcctatggtcgggccatc
tcctccaagaaccgggcgcagctctaccgtctccgcaagtggcagcgccggatccgtgtc
agtaatgcaaccgagcgcaacctcgcattcgccctctccgagctggaccgcatggcctcg
gcactgggcctgccgcggaacgtccgtgagaccgcggccgtcgtctaccgtgacgctgtt
gacaagaacctgatccgtggccggagcatcgaaggtgttgcagcagctgcactctacgca
gcctgccggcagtgcagcgtgccaagaacgctcgacgagattgcagaagtatcccgtgtt
tcaaggaaggaaatcggcaggacataccggttcatctcccgtgaactgggactcaagctt
ctcccgacctccccgatcgactacgtgccccggttctgctcaggcctcaccctcaagggc
gaggtgcagagccgtgcagtggagatcctccgtcaggcaggggaacgcgaactgacaagc
ggccgtggcccgacgggtgtcgccgcagcagccatctatatctcctccatcctgggcggg
gagcggcgcacccagcgcgaagtagcagaggtcgccggtgtgaccgaggtcaccatccgg
aaccggtacaaggaactggcagagaaactcgatatcgagatcatcctctaa
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