Methanoregula formicica: Metfor_0454
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Entry
Metfor_0454 CDS
T02392
Name
(GenBank) putative transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
mfo
Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfo03000
]
Metfor_0454
Transcription factors [BR:
mfo03000
]
Prokaryotic type
Helix-turn-helix
Other families
Metfor_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
HTH_24
MarR
MarR_2
HTH_Crp_2
HVO_A0261_N
HTH_11
HTH_5
Rrf2
DUF7343
HTH_PafC
HTH_45
HTH_IclR
Mnd1
GntR
Fe_dep_repress
HTH_13
HTH_23
HTH_3
TrmB
WHD_MCM4
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGB01526
UniProt:
L0HCJ3
LinkDB
All DBs
Position
458529..459338
Genome browser
AA seq
269 aa
AA seq
DB search
MTPGVKDPLYSILRSKREVSRLQILVEIAEHQPAVRQQEIAGKLGVTPQAISEYIRELVD
EGMVSASGRGNYEVTKSGIEWVLANAESLESYARHIRRDIIQQVSVWTAIAAENVKAGDE
VGVYMKDGFLYAAKKPSAATGSAIADAKKDEDVGIARLNGIIDHHEGVVHVCKVPRIQHG
GSRKVKRDKLLDVIGKAGFVGAVGLEAFIALKAAGRKPDMFFGAREGVIEAAFHGIDCTI
VVVDEEFTDFLKRLEGVGLSYVIHDLIVP
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
ttgacaccgggcgttaaggaccccctctattctatcctccggagcaagcgcgaggtctcg
cgcctccagatccttgtcgagatcgccgagcaccagccggcagtccggcagcaggagatt
gccgggaagctgggtgtgaccccgcaggcgatctccgagtacatccgcgagctcgtggac
gagggcatggtatcggcaagcggcaggggcaactacgaggtcacgaagtcgggcatcgag
tgggtgcttgccaatgccgagtcgcttgagtcctatgcccggcacatccggcgcgacatc
atccagcaggtctcggtctggaccgcgattgcggccgagaacgtaaaggccggcgacgaa
gtcggcgtgtacatgaaggacggctttctctatgccgcaaagaagccctcggcagcaacc
ggctcggcgatcgcggatgcaaagaaggatgaggatgtcgggatcgcacggctgaacggg
atcatcgaccaccacgaaggcgttgtccatgtctgcaaggttccccggatccagcatggg
ggctcgcgaaaggtgaagcgggacaagctccttgacgtgatcggaaaagccgggtttgtc
ggggcggtaggcctcgaagccttcatcgccctgaaagcggcaggcaggaagccggacatg
ttctttggcgcacgggagggcgtgatcgaggccgcgttccacgggatcgactgcaccatt
gtggtcgtggacgaggagttcacggatttcttaaagcggctggaaggcgtggggctctcg
tacgtgatccacgacctgatcgtcccgtga
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