Methanoregula formicica: Metfor_0524
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Entry
Metfor_0524 CDS
T02392
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mfo
Methanoregula formicica
Pathway
mfo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Metfor_0524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfo03019
]
Metfor_0524
03009 Ribosome biogenesis [BR:
mfo03009
]
Metfor_0524
03036 Chromosome and associated proteins [BR:
mfo03036
]
Metfor_0524
Enzymes [BR:
mfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Metfor_0524
Messenger RNA biogenesis [BR:
mfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Metfor_0524
Ribosome biogenesis [BR:
mfo03009
]
Eukaryotic type
90S particles
RNase
Metfor_0524
Prokaryotic type
rRNA processing factors
Metfor_0524
Chromosome and associated proteins [BR:
mfo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Metfor_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Ribonuclease_3
Ribonucleas_3_3
DSRM_MRPL44
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGB01594
UniProt:
L0HER1
LinkDB
All DBs
Position
518592..519350
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AA seq
252 aa
AA seq
DB search
MTGHSCLPLIELLRAPRPDLGRTITTFVSCFNTTYGDPAKDHWDISIAEWERYEFLGDRV
LNLIVAQALFTRKHSALTEGEMTRAISGIVSNHALDAIVRHLVDFEVFSRLIPPAIAGQN
TYGERITGGAFEAFIGALYCEIGLDEVAFFINALLREPIDQASPEENTIGMLQEYFQKRF
RAVPIYRETKREGPDHRPIFTFEVLFNNQVLGTGSGESIQKAEREAARAACRKLGLSLPD
PVGTQPGDPGTS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacactcgtgcctgccccttatcgaacttctccgtgcgcccaggccggacttg
gggcggactatcacgacgtttgtctcctgcttcaacacaacctacggcgatcccgcaaag
gaccactgggacatctctattgccgagtgggagcgctacgagtttttgggagaccgcgtt
ttgaacctcattgttgcccaggcccttttcaccaggaaacattccgcgctcactgaggga
gagatgacccgtgcaatcagcgggatcgtctcgaaccatgcgctcgatgccattgtccgg
cacctggtggatttcgaagtcttctcccgtctcattcccccggcgattgcagggcagaac
acgtatggcgaacgaataaccgggggggcgttcgaggcattcatcggcgccctgtactgc
gagatagggcttgacgaggtggcattcttcatcaatgccctgttgcgggaacccatcgac
caggccagtcccgaagagaacaccatagggatgctgcaggaatatttccagaaacggttc
cgggccgttcccatctaccgggaaacaaaacgggagggaccggaccaccggcccatcttc
acctttgaagtgctcttcaacaaccaggtgctcggtaccgggagtggcgagagcatccag
aaagcagagcgggaagcggcccgggccgcatgcaggaagcttggcctctccctcccggat
ccggtggggacgcagccaggtgatcccggcacatcctga
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