Methanoregula formicica: Metfor_0743
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Entry
Metfor_0743 CDS
T02392
Name
(GenBank) PDK repeat-containing protein
Organism
mfo
Methanoregula formicica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Beta-prop_ACSF4
DUF5050
InlK_D3
MG2
ChitinaseA_N
aBig_2
Motif
Other DBs
NCBI-ProteinID:
AGB01803
UniProt:
L0HER4
LinkDB
All DBs
Position
729731..736180
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AA seq
2149 aa
AA seq
DB search
MIPRLFRVAALLLCLVFMMVPAMADGGLANSPWPKYGYDLNNTGRSPFIGSQDATVKWIY
PAPGNFTYSSPVIGPDGTIYIPNYGDKNLYAINPDGSVKWTYYSGGNLYYSPAIGSDGTI
YFGDYTNYNLTALNPDGTRKWNFTTGGSVQASPAIGPDGTIYVPGYSSNKLYALNPDGTE
KWNFTTGGGMRGGSPAIGPDGTIYIGTYADKKLWAVNPDGTEKWTFTTGGSVYNQPAIGA
DGTIYVTSYTDKKLWAVNPDGTEKWNFTTGYSIAAGPAVGSDGTIYIGSRYANGKFFALN
SDGTQKWNFTTSAMIPEAPAIGADGTIYFGTYSTASGKTRNFYALNPDATQKWIFTLGTG
LAQDIQGSPAIGSDGTVYVATKEGKLYAFNGVVDYTADQTAGKETLAVQFTGTSTVSPSS
WSWDFGDGGTSTLQSPSHTYTSPGSYTVNLSIVNQTYGTTNYLRRTGYIKVYSAPTAAFT
TNVTGGFYNLPVSFTDQSTNIPTAWNWSFGDGSYASSQNATHTYTAPGNFTVNLTVTNPA
GSNTTSKKAYIAVSAPTIPVASFTANQTGGIPGLAVQFTDSSTLNPTAWNWSFGDATYSE
LRNPVHTYSSAGSYDVSLNASNSYGSNILTKTGYITIDAPAAPVANLTVSHRVGLAPLAV
QFNDTSAHYPTSWSWNFGDSSSTSALKNPSHTYTSAGNYTVTLTATNAQGTSTNTSTYPV
TVLAAEAPLSNFHFINIYTANDEGVRFDVPNGVFNSGGAYTYVPNTYWVMFRNAGGGTNP
MRISALSSSWNAADRTTTSSQSGHFWISQSGGQQTMHNGILMIAVNGTIPDDFKVHIKST
GEIFDVGSPDITNIWQFAAPGETQRVTGVDQTFDKNDFIYGTQSWKPDSTADRPIFYGED
QTDPINQFHIMFVDLRAGTCQNTSLPDNGQLRVDYSFTNLSGRAVFNAYGWYMRSNHGTG
VIMTSNNDACGYTVDPVTSPPAADFAANSTSAPVGSAVQFTDKSTNAPTSWSWDFGDGGV
SSLQNPAHTYTTAGTYTVKLTATNGVGPDTVSKLSYIAITQPLPTYNDIYVAVANTAGPK
YNSFSNNTYHILFQGAGQGLNALHISTDPTANYGQVTISENQSGTFYATDSGGKGYEDEI
ILMVAVNGTLPDDFRMTINSDGYTWTPNTASNTAPTADSIVYQSSALSQTFSGSDFRYGP
QIWKPTADGLNYPIYSGQDMSNTANTFQLMFVDLNSGVLHPDSSLMNNGAVRINYSFQNL
TSFAAFSVYGYCKNSNAGADMIGWTNALTSDKTMSGYSVVGTGGSVGPVAGFTANTTVAA
ILAPIQFTDTSTGVPTSWSWDFGDSSTSAEQNPVHAYSSAGTYTVKLTATNDKGSNTVTR
SNYITVSESAGTSVASFTASVVNGVAPLTVTFTDTSTNTPTGWTWDFGDGGASSYQNPTH
TYGTAGTYTVKLSATNSKGSTTHSASSLIYVANETGALPDYHNVYIRTANHDGIQWDTTN
NGTYYVPSASKGSGLASLHISTDASDNTGKITETVSQDGTFYAISSDYQDDVILLVAVNG
TVPDNFAVRIRTSGYTWTPVSGSAPVSGTYQSAALDQTFTKKDLFYGPQNWKPTQGDVDY
PLIHGEDMNSTAYMYQLMFIDTRVGAVKNTSFVNNGAVKIQYTFTNLPDTASFGVYGWKT
AKGMGFTNEINSSGYIVVSPSIGLPAVADFAANQTEGIAPFNPRFKDTSLNTPTGWAWDF
DNDGVIDNTKQIPDYTYTAAGTYSVKLTATNSKGSDTKTRSGYIIVTAPKETTNAFTLTG
VNATTTGSAQTIAVNASNSTTSSNIITVTNVSSTWDHLNVALAAAPADDGLGNLTGTVQS
VEAVAANVTVPIESLGNPNVTLSLTMSQVPNSTAAITSTISSDPDASVWSSFTLAASSQN
KEIVATAYTVNFTKTDIANSGTGGIIQSANITMAVNHTWVEDNGGKSRIVVMHRSDAGKV
TFLTTEWTGLCAADGNDYFVAVSPEGLSTFVLTAYAPVTTTTSSSSSSWSYYGGSDSYTY
YPPTTAIPAVTATGTATATPTATPVQTEPTKPKVRITPWPTGEVQPAPQEESIMPAVSNA
TGPGMKTLWKNPLFLAAEIIAAIAILTVATAGYLKKRRRDRDPLRWDEK
NT seq
6450 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcggctcttccgggtagcggcgctcctgctctgtcttgtattcatgatggtt
cctgccatggcggatggcgggcttgccaacagcccgtggccgaagtacggatacgatctc
aacaacaccggccggtccccgttcatcggttcgcaggacgctacggtaaaatggatctat
ccagcacccggtaacttcacgtatagtagcccggtcattgggccggatggtactatctat
atcccgaattatggcgacaagaatctctatgccatcaaccctgacgggtccgtcaagtgg
acatactatagcggagggaatctttattattcacctgcaatagggtccgatggcacgata
tacttcggggactacacgaactataatttaaccgcgctgaacccagacgggacacggaaa
tggaacttcacaactgggggatcagtccaggcctcaccggcaattggccccgacggtaca
atttatgtgccaggttatagcagcaacaagctctatgcgctaaacccggacgggaccgag
aaatggaacttcacaaccgggggaggtatgcggggaggttcaccggcaatcggccctgac
ggtacgatttatatcggaacctatgctgacaagaaactctgggcggtgaacccagacggg
accgagaaatggaccttcacaaccgggggatctgtttataaccagccagcaatcggtgct
gatggcacgatttatgtaacgtcatatacggacaagaagctctgggcggtgaacccggat
gggaccgagaaatggaatttcacgaccggatattcgatagctgccggacccgccgtcggc
tcggatgggacgatctatatcggatcacgttatgcgaatgggaagttttttgcgctgaac
tctgatggaacccagaaatggaactttactacatctgcaatgataccggaagcccccgca
atcggcgctgatggcacgatttatttcgggacctattcgacagcttcaggtaaaacgagg
aatttttatgcgctgaaccctgacgcgacccagaaatggatcttcacacttgggacagga
ttagctcaagatatacaaggttcccccgcgatcgggtcggacggaaccgtgtacgtcgca
acgaaggaggggaaactatacgccttcaacggcgtggtcgattacaccgcagaccagacc
gccggaaaagagacgcttgccgtccagttcaccggcacctcgaccgtgagcccctcgtcc
tggtcctgggacttcggggacggcggcacctcaacgctccagagcccgtcccacacttac
acatcccccgggtcctacacggtcaacctttccatcgtcaaccagacgtacgggacgaca
aactacctccgcaggacgggttatatcaaggtctattcggcgccgacagccgcctttacc
acaaacgtcaccggggggttctataacctgccggtcagcttcaccgaccagtctaccaat
atcccgactgcgtggaactggtcctttggcgacggcagctacgcttcaagccagaatgca
acccatacgtatacggcaccgggaaacttcacggtcaacctcacggtgaccaatcccgcg
ggcagcaacaccaccagcaaaaaggcatatatcgcggtctctgctccaaccatccccgtg
gcatccttcaccgccaaccagaccggcggcatccccggcctggccgtccagttcaccgac
tcgtccacgctgaacccgaccgcgtggaactggtcctttggcgacgcgacgtacagcgag
ctccggaacccggtccacacgtattcgtcagccgggtcctacgatgtgagcctgaacgcg
tccaactcatacggatccaatatcctcacgaagaccggctatatcacgatcgatgccccg
gccgcgcccgtggcaaacctcacggtctcccaccgcgtcggccttgcgcccctggccgtc
cagttcaacgatacctcggcgcactacccgacatcgtggagctggaacttcggggacagc
agcagtacgtcggcgctgaagaacccgtcgcatacctacacttcggcagggaactacacg
gtcacgctcacggcaaccaacgcccaggggaccagcaccaacaccagcacgtatcccgtc
acggtccttgcggcggaggccccgctctccaacttccacttcatcaacatctacacagcc
aacgacgagggtgtcaggttcgatgtaccgaacggcgtgtttaactccggcggcgcctat
acctacgtcccgaacacctactgggtcatgttccggaacgccggcggcgggacgaacccg
atgcgcatctccgcgctgagttcgagctggaacgctgccgatcgcaccaccacgtccagc
cagtccggccacttctggatctcgcagagcggcgggcagcagaccatgcacaacggcatc
ctgatgatcgccgtcaacggcaccatcccggacgattttaaggtccatatcaaatcgacc
ggcgagatatttgacgtcggttcaccggacataacgaacatctggcagttcgccgccccg
ggcgagacccagcgcgttaccggggttgaccagacctttgacaagaacgacttcatctac
ggcacgcagagctggaagcctgacagcaccgcggaccggccgatcttttacggtgaggac
cagaccgacccgatcaaccagttccatatcatgttcgtcgacctccgggccggcacgtgc
cagaacacgagcctgcctgacaacggccagctccgggtagactacagcttcaccaacctc
tccggccgggcggtgttcaatgcctatggctggtacatgcggtccaaccacggcaccggc
gtcatcatgacgagcaacaatgatgcctgcgggtataccgtggacccggtcaccagcccc
ccggccgcggattttgcggcaaattcaacatctgcaccggtcggttccgcagtccagttc
accgacaagtcgacgaatgccccgacaagctggtcctgggacttcggtgacggcggggta
tcctctctccagaatcccgcgcacacttacacgacagctggcacctatacagtaaaactc
acggcaacaaacggtgtagggccggatactgtgtcgaaattgtcctatattgcgataacc
cagccgctcccgacctacaacgacatctatgtcgctgttgcaaatactgcaggaccgaag
tacaattccttcagcaacaacacctaccacatcctattccagggtgcaggccagggactg
aacgccctgcacatctccacagacccgacagcgaattacgggcaggtgaccatatccgag
aaccagagcgggacgttctatgccacagattccggcggaaagggatatgaggacgagatc
atcctgatggtcgcggtcaacggaacccttccggacgatttccggatgacgatcaattcc
gacgggtatacttggaccccgaataccgcaagcaacaccgctcccaccgccgacagcatt
gtctaccagtcctcggcactcagccagacgttctcgggcagcgacttccggtacggcccc
cagatctggaaacccacggcggacggcctgaattatcccatctattcgggacaggacatg
agcaacaccgcaaataccttccagctgatgttcgttgacctgaactccggggtgctccat
ccggattcgagtctcatgaataacggtgcggtaaggatcaactactcattccagaacctg
acctcctttgcggcattcagcgtctatgggtactgcaagaactctaatgccggtgctgat
atgatcggctggaccaacgcactcacttccgataagacaatgagcgggtactcggttgtc
gggaccggaggatcagtcggaccggtagcaggtttcacggcgaacacaaccgtcgcggcc
atccttgcaccaatccaattcacggacacgtcgaccggcgtcccgacctcgtggtcctgg
gactttggcgacagcagcacatcagctgaacagaacccggtccatgcctacagcagcgcc
ggtacctacacggtcaaactgaccgcaaccaacgacaagggatccaacaccgttacccgg
tcgaattacatcacagtgtcggaatccgccggaacatcggtcgcctcgttcaccgcatcg
gttgtcaacggtgtcgccccgctgaccgtgactttcacagacacatcgaccaacactccg
accggctggacgtgggacttcggcgatggcggggcatcgtcctaccagaacccgacgcac
acctatggtacagccgggacttacacagtgaaactctccgcaaccaacagcaaggggagc
actacgcactcggcgtcaagcctcatctacgtggccaacgagaccggagccctgcccgac
taccacaatgtctatatccggacagcaaaccacgatggcatacagtgggatactacgaat
aacgggacctattacgtaccttcagcctcgaaaggcagcggcctcgcgtctctccatatc
tcaacggatgcctctgacaacaccgggaagataacagaaacggtcagccaggacgggacg
ttctatgccataagttccgattaccaagacgacgtcatcctgctggttgccgttaatggc
acggtcccggataattttgcggtcaggatcaggacgagcggatacacgtggacacccgtt
tccggctctgcgccggtatccggcacgtaccagtccgcggctctcgaccagacatttacc
aagaaggacctcttctacggcccgcagaactggaaacccacgcagggcgatgtcgactac
ccgctcatccatggtgaggacatgaacagtacggcatacatgtaccagctcatgttcatc
gatacccgggtcggggccgtcaagaacaccagcttcgtcaataacggtgcggtgaagatc
cagtacaccttcacaaaccttcctgacacagcaagtttcggcgtctatggctggaagacc
gccaagggcatgggcttcaccaatgagatcaacagcagcggatatatcgtggtctccccg
tctatcggcctccccgcggtcgcggacttcgccgccaaccagaccgaaggcatcgcgcca
ttcaacccgaggttcaaggacacctcgctcaacacgccgaccggctgggcatgggacttt
gacaatgacggagtcatcgacaataccaaacagatcccggactacacctacacggcagcc
ggcacctattcggtcaagctcaccgcaaccaacagcaagggctccgatacaaagacccgg
tccggctacatcatcgttacggccccgaaagagacgacgaatgccttcaccctcaccggc
gtcaacgctacaacaaccggctccgcccagaccatcgcggtcaacgccagcaactcgacc
accagcagcaatatcataaccgtgaccaatgtcagcagcacctgggaccacctcaatgtc
gctcttgctgccgctccggcagatgacggactgggcaacctgaccggcaccgtgcagagc
gtcgaggccgttgccgcgaatgtcaccgtcccgatcgagtcgctcggcaacccgaacgtc
acgctctccctgacgatgtcacaggtccccaacagcacggccgccatcaccagcaccatc
tcgtccgatcccgacgcatcggtctggagctcgttcacgctggcggcctcctcgcagaat
aaggagatcgtggcaaccgcgtacacggtcaacttcaccaagaccgatatcgccaattcc
ggcaccggcggcatcatccagagtgccaacatcacgatggcggtcaaccacacctgggtc
gaggacaacggcggcaaatcccgcatcgtggtcatgcaccggtcggatgccgggaaagtc
acgttcctgacaaccgaatggaccggcctctgcgctgcggacggcaacgactactttgtt
gcggtctcacccgaggggctctcgacattcgtcctgaccgcatacgcaccggtgacgaca
acgaccagcagctcctcgtcgtcctggtcgtattatggcgggagcgacagttatacttat
tacccgcccaccacagcaattcccgccgtcacggcaacggggaccgcgaccgccacgccg
accgcaaccccggtccaaaccgaacccacgaaaccgaaggtgaggataaccccgtggccg
accggagaggtgcagcccgcaccgcaggaggaatccatcatgccagccgtcagcaacgca
accgggccgggaatgaaaacactctggaagaacccgctcttccttgccgcagagatcatc
gccgcaattgccatccttaccgtggcaaccgccggctatctgaagaagaggcggcgtgac
cgcgacccgctccggtgggatgaaaaatga
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