Methanoregula formicica: Metfor_1027
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Entry
Metfor_1027 CDS
T02392
Name
(GenBank) DNA-directed RNA polymerase, beta subunit/140 kD subunit
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mfo
Methanoregula formicica
Pathway
mfo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metfor_1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfo03021
]
Metfor_1027
Enzymes [BR:
mfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metfor_1027
Transcription machinery [BR:
mfo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metfor_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AGB02077
UniProt:
L0HBF3
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All DBs
Position
1002643..1004211
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AA seq
522 aa
AA seq
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MVSLIDRSILSRAYFSREHVARHQLDSFNYFLKHNLQKVVNEQRIIETDIENRGRNNDPV
WVELGNIEVKKPLVREADGSQGELYPSEARLRNLTYAAPIQLSLTLVHGDDRQDPIITTI
GQLPIMVGSLACNLYGMDDAQRVSHGEDAFDAGGYFIVNGTERVLMTLEDLASNKIMTEF
TERYNERIYVAKVFSQFRGYRALVVVERNKKNLLEVSFPSVAGHLKFVDLMRALGMTNDQ
EVVNAVSSDEDILTFMMQNLEESECDSVDGGIMYVGKKLAPNQTKDYQRKRAEFVLDNYL
LPHLNYAMPAHLKEGDEGYQEAVLSVRLAKAHFLGRMAEACFDLVLNKRRIDDKDHYSNK
RLKLAGDLMEDLFRISLNRLTRDIKYQLERASMRHRDLSIATAVRADVLTERLLHPLATG
NWVGGRTGVSQLLDRVDHMAVLSHLRRVISPLSRSQPHFEARDLHPTQWGRICPSETPEG
PNCGLVKNFAQMVEISKGVDDEEEIMRILHNLGVEHIRGEVQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttggtcagtctgattgacagaagtattttatcgagggcatatttttcacgggagcatgtt
gcgcgccaccagcttgactccttcaactatttcttgaaacacaatctccagaaagtggta
aacgagcagcggatcatcgagaccgacatcgagaaccggggcaggaacaatgacccggtc
tgggtcgaactcggaaacatcgaggtaaaaaagccgctcgtccgggaggcagacggttcg
cagggagaactctacccgagcgaggcccgtctccgcaacctgacgtatgcggcacctatc
cagctgagcctcaccctggtccatggcgatgaccggcaggaccccatcatcaccacgatc
gggcagctcccgatcatggtcgggtcgcttgcctgcaatctctacggcatggacgacgcc
cagcgcgtctcccacggcgaggacgccttcgatgccggcggctatttcattgtgaacggg
accgagcgtgtgcttatgaccttagaggaccttgcgtccaacaagatcatgaccgagttc
accgagcgctacaatgagcgcatctacgtggccaaggtattctcccagttccgcgggtat
cgcgcgctggtggtcgttgaacggaacaagaagaaccttctcgaggtctctttcccgtcc
gttgccgggcacttaaagttcgtggatctgatgcgcgccctgggcatgacaaacgaccag
gaggtcgtcaacgcggtttcaagcgatgaggatatcctgacgttcatgatgcaaaacctc
gaagagagcgagtgcgattcggttgacggcggcattatgtacgtgggcaagaagcttgcc
ccgaaccagaccaaggactaccagaggaagcgcgccgagttcgtgctggacaattacctc
ctgccacacctcaactacgctatgccggcacacttaaaggagggcgacgagggctatcag
gaggctgtcctctcggtacggcttgcaaaggctcacttcctcgggcgcatggctgaagcc
tgtttcgatctggttttaaacaagcgccggatcgatgataaggatcactactcgaacaag
cggctgaaacttgccggtgacctgatggaggatctcttccgtatttccctcaaccgtctg
acgagagatatcaagtaccagctcgagcgcgccagcatgcggcaccgcgacctatcgatc
gcaaccgcggtccgcgccgatgtgttgaccgagcgcctcctccatcctcttgccaccggt
aattgggtaggcggaaggaccggtgtctcccagctccttgaccgtgtggatcacatggcc
gtgctctcgcacctccgtcgcgtcatctcgccgctctcccggtcacagccccacttcgag
gcccgtgacctgcacccgacccagtggggccggatctgcccgagcgagacacccgaagga
cccaattgtggtctggtgaaaaactttgcccagatggtggagatcagcaagggtgttgac
gacgaggaagagatcatgcgcatcctgcataaccttggcgtcgagcacatccggggtgag
gtccagtga
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