Methanoregula formicica: Metfor_1111
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Entry
Metfor_1111 CDS
T02392
Name
(GenBank) TIGR01213 family protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mfo
Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_1111
Enzymes [BR:
mfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Metfor_1111
Transfer RNA biogenesis [BR:
mfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metfor_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Crystall_4
Motif
Other DBs
NCBI-ProteinID:
AGB02159
UniProt:
L0HGH3
LinkDB
All DBs
Position
1080192..1081424
Genome browser
AA seq
410 aa
AA seq
DB search
MGMNEQVKAILAYGETCDHCLGRFFGKRSHGLSNDERGRGLKIALALEENQPYKKFAGTC
WVCGNFFDDVPLWADRVIYATKDIEFSTFLAGCRVPPMIAENEEMVWSDLSLAEPEPFKS
EVNREVGKAVSARTGKVVDFKKPEVVTILDPATGGVEVQINSVFFYGRYQKFERGIPQTH
WDCRACKGAGCEKCNFTGAQYLDSVEELIGRPVIEMFNAENAILHGAGREDIDARMVGTG
RPFILEVVSPRKRSIDLAELEKTINSTAGGRISVAIRRWADRAEVETLKSNKAHKKYRIL
VEVDGEIAADEFAKAVKTLEGVTIYQRTPERVAHRRADKVRERTVLGIECVGEQDGKFIV
EVLGEAGLYIKELVSGDSGRTRPSLAEILKRSARVTSLDVTQVEGAQEGE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaacgaacaggtgaaagcgatcctcgcgtacggggagacgtgcgaccactgc
ctcgggcggttcttcgggaaacgctcgcacgggctctcgaacgatgaacggggacggggc
ctgaagatcgcccttgcccttgaggagaaccagccgtacaaaaagtttgccggtacctgc
tgggtctgcgggaacttcttcgatgatgtgccgctctgggcggaccgcgttatctacgca
acgaaggacatcgagttctcgacgttccttgccggttgccgggtcccgcccatgattgcc
gagaacgaggagatggtctggagcgatctctcgcttgcggagcccgaacccttcaagtcc
gaggtgaaccgggaggtcgggaaggccgtatcggcacggaccggcaaggtcgttgacttc
aaaaagcccgaggttgtcaccattctcgatcctgcaaccggtggcgtggaggtccagatc
aactcagtctttttctatgggagataccagaagttcgagcggggcatcccccagacgcac
tgggactgccgtgcctgcaagggggcaggctgcgagaagtgtaactttaccggtgcccag
tatctcgactcggtcgaggaactgatcgggcggcccgtgatcgagatgttcaacgcggag
aatgcgatcctccacggcgcgggtcgcgaggacatcgatgcccgcatggtcgggacaggg
cggcccttcatccttgaagtagtatcgccaaggaagcgttccatcgaccttgcggaactg
gaaaaaaccatcaacagcactgcgggcggcaggatctccgttgcgatcaggcgctgggct
gaccgtgcggaggtggaaacccttaaatcaaacaaagcgcataaaaaatacaggatcctg
gtcgaggttgacggcgaaatagcggcggatgagttcgcaaaagccgtaaaaaccctggag
ggcgtcacaatataccagcgcacgcctgaacgggttgctcaccgccgggccgacaaggtc
cgcgagagaacagtcctcggaatcgagtgtgtaggggagcaggacggcaagtttattgtc
gaagtcctgggcgaagccggcctctacataaaagaactcgtgtccggggactccgggcga
acccgtccgagtcttgccgagatcctgaaacgaagcgctcgcgtcaccagcctcgacgtt
acgcaggtggaaggagcacaggagggagaataa
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