Methanoregula formicica: Metfor_1625
Help
Entry
Metfor_1625 CDS
T02392
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mfo
Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_1625
Enzymes [BR:
mfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Metfor_1625
Transfer RNA biogenesis [BR:
mfo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Metfor_1625
Prokaryotic type
Metfor_1625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGB02655
UniProt:
L0HF90
LinkDB
All DBs
Position
1577278..1578216
Genome browser
AA seq
312 aa
AA seq
DB search
MSGETLQVYFLGTAGALPTPSRNPPCIMVRRGSDTLLFDCGEGAQQQMMRARCGFTVNAI
FVTHWHADHFLGIFGLVQTMSFNGRTEPLTIYGPDWVHEFVRTLRHVARFNLKFPMESVE
LAPGSWVRFEGYTVTAFAASHGMPTLGYILEEDPRPGRFDREQAIALGVPPGPLFGKLQR
GETVTVKAGETSTEVRPDQVMGPQRPGRKIVYTGDTRAIHETIADVAANADLLIHDATYD
EAESARAAEFYHATAAQAGEAATALNAGTLVLIHTSSRYPDAKTHVTEARSRYAGTIVVP
NDLDMIEVPFRD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgagaccctgcaggtctatttcctcgggacggccggtgcccttcccacgcct
tcgcgcaacccgccctgcatcatggtgcggcggggctccgatacgctcctcttcgactgc
ggggaaggtgcccagcagcagatgatgcgggcccggtgcgggttcaccgtgaatgccatc
tttgtcacccactggcatgcggaccatttcctcgggatcttcggccttgtccagaccatg
tccttcaacggccggaccgagccactgaccatctatggcccggactgggtgcacgagttc
gtcaggaccctccggcatgttgcacgcttcaacctgaagttcccgatggaatcggttgag
ctggctcccggatcctgggtgcgcttcgaagggtataccgtcaccgcgttcgccgcttcc
catggcatgcccacgcttggctacattctcgaagaggatccgcggccgggacggttcgac
cgcgagcaggccatcgcccttggcgtgcccccgggcccgctgttcgggaaactccagcgg
ggggagacggtaaccgtaaaagccggggagacaagtacggaagtcaggccggaccaggtc
atgggcccgcagaggccgggacggaagatcgtctatacgggggacacccgcgccatccac
gagaccattgcagacgtcgctgccaatgccgatcttctcatccacgatgcaacctatgac
gaggcggagtccgcacgggctgccgagttttaccacgccaccgctgcccaggccggcgag
gccgcaacagcgctcaatgccggcacgctcgtcctcatccacaccagctcacggtacccg
gatgccaagactcatgtcaccgaagcgcggagcaggtatgccggcaccattgttgttccc
aatgacctggacatgatcgaggtcccgttccgggactga
DBGET
integrated database retrieval system
