KEGG   Methanoregula formicica: Metfor_1730
Entry
Metfor_1730       CDS       T02392                                 
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mfo  Methanoregula formicica
Pathway
mfo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Metfor_1730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mfo03000]
    Metfor_1730
   03021 Transcription machinery [BR:mfo03021]
    Metfor_1730
Transcription factors [BR:mfo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    Metfor_1730
Transcription machinery [BR:mfo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Metfor_1730
  RNA polymerase III system
    TFIIIB
     Metfor_1730
  RNA polymerase I system
    SL1/TIF-1B
     Metfor_1730
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: AGB02757
UniProt: L0HDG9
LinkDB
Position
complement(1702742..1703305)
AA seq 187 aa
MKKMQDDPIRIQNIVAAGPVADSIDLTHLLNAVPECRFDKKRFPGAVYYMQDPKAVALIF
GSGKVVITGIARQEDLVPATKNLLAVLKTANIACHDEPRVSVRNIVCTCSFGRECNLVRM
VASLMDSDWVEYEPESFPGLVCRLTDPKVVFLLFSSGKAVITGGTNLADIRKGLEIFREK
LGRTGVL
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaaaaaaatgcaggacgatccgatcaggatccagaatatcgttgccgccggaccggtt
gcggattccattgacctgacgcatctcctcaatgcagtaccggagtgcaggttcgacaag
aagcggtttcccggcgccgtgtactatatgcaggaccccaaagccgttgccctcatcttt
ggatccgggaaggttgtcatcaccggcattgcccggcaggaagaccttgtgcctgccaca
aagaaccttcttgcagtgctcaaaaccgccaacatcgcctgccatgatgagccccgcgtc
tcggtccggaacattgtctgtacctgcagtttcggccgggaatgcaacctggtccggatg
gtcgcttccctcatggacagcgactgggtggagtacgaaccggagagtttcccggggctg
gtctgccggcttaccgaccccaaagtcgtcttcctcctcttctcttccgggaaagccgtc
atcaccggggggacaaaccttgccgatatccggaaagggttagaaatcttccgggaaaag
ctcggccgtaccggcgtcctgtag

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