Methanoregula formicica: Metfor_1906
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Entry
Metfor_1906 CDS
T02392
Name
(GenBank) ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing
Organism
mfo
Methanoregula formicica
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
AAA_30
PhoH
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGB02925
UniProt:
L0HFX2
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Position
1858001..1861318
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AA seq
1105 aa
AA seq
DB search
MAATPRQGEAITTHDRSMVVTAGAGTGKTYVLVQKYIDLLKTRPVTVPQILALTFTDKAA
AEMKERIRAEILRHEGPRWEKAAEDFMIAPVQTFHSFCAQVLREFPIEAGLEPGFVVLDE
QQAGRIRNQAFDELIHSPQDGPVNEALVHVLSITDQTNLRKILSALYERRERYAQFFAAL
DADETQVLETWTREVSEFRDEEIAALRNDPSFSSCVRTLLGFASAYAGVDDKAAQFLGEI
QPLLSRLSDPEDSGKFCSAALELERKRLGNIGSKKNWRGNDLAEFKSSRKSLNDILVQKI
SLFRMTVDPSDPVITGSIRFLHDLSFVFSRYLELVGTGKGSLGGLDFSDLILHARRLFLE
QRDLVTTHFMPRFRYILVDEFQDTDLTQFDIILSIIGTPSPSTDCLFIVGDPKQSIYLFR
DADVTRFKEAQEIITKACTGRKIDLDTSFRSTKEVIGLANFLFSRLLASAEKPWEFGYEP
VRISGNRADHTGSVELLLPPKGSDAAGTKRNEAAMVARRIQSAIHSRPLTVYEEQPDHSF
ARRPARYGDIAILLEQRTNLPQYISALGEYGIPFYVHGGTGFYHRQEVYDLTNILSFLEY
RHDNVSLAGILRSPYFGLPDTELFHIAQENGRTLWDKLGKYARRTGPGPATRARDLLASW
QTYAGRTGLVSLLRRILSESGVYTVYAALPAGEQILANIEKLVAMARAREEAGNYSLADF
TTDLRLAMEDDEREGEAHLDALAENAVNIMTVHAAKGLEFPIVFVPDMGMSFPNTTSPIL
IGDNPLMVGVKVPNPRENFEMTESPVFLALREQQKQKERAERKRLLYVALTRARDHLIMS
GTMPEDSGLSYDLSRSRIEWIFTAFGVTGDAIATGGLDLELPDGTGSIRLSIVSDSDSIP
AEIGRVEPELIIVPKECAGMCGSWQPPEYKVGKRRIRPVSVSELEKAETKIPEPHEKVAS
KYLPGVEGAKKGTIIHEVLRGRDAATVLREYGEYSEEHVRQCEEILSAFLNSDLMKRVKR
SYCEVPFVVTVDGGPVTGKIDRLCEMEDGSWVVIDYKSETSADYAAVAEGYAFSIAVYVE
AACQIIRGTVTAVVHFTELGMFWKR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacaccacgacagggcgaagcgatcacaacccacgaccggagcatggtggtc
acggccggcgccgggaccggtaagacctacgtgcttgtgcagaaatatatcgacctgctc
aaaacccggcccgtcaccgtgccccagatccttgcgctgacgttcaccgataaagccgcg
gccgagatgaaagagcggatccgggccgagattctccggcacgaaggcccgcggtgggag
aaggccgctgaggatttcatgattgcgccggtccagacgttccactcgttctgtgcgcag
gtgctccgggaattcccgatcgaagccggcttggaacccggctttgtcgtgctggacgag
cagcaggccggccgcatccgcaaccaggcattcgatgaactcattcactccccgcaggat
ggaccggtcaacgaggcgctcgtgcatgtcctctccatcacggaccagaccaacctccgg
aagatcctctctgcactctacgagcggcgggagcgctatgcacagttctttgcggctctt
gatgctgatgagacgcaggtgctggaaacctggacgagagaagtatccgaattccgggac
gaggagattgcagcactccggaacgatccctcgttctcctcatgtgttcgtaccctgctg
gggtttgcatccgcgtatgcaggtgttgatgacaaggctgcacagttcctgggggagatc
cagcccctcctttcccgactttctgatcctgaagattcaggaaaattctgttcggctgct
cttgagctggaacggaagagacttgggaatatcgggagcaaaaagaactggaggggcaat
gatcttgctgagttcaagagttcacgcaagagcctgaacgacattctcgtacagaaaatt
tccctcttccggatgacggtggatccctccgacccggtgatcaccgggtcgatccggttc
ctgcacgacctgtcctttgtgttctcccggtacctggaactggtagggaccggcaagggt
tctcttgggggcctggacttttcggacctgatcctccatgcccgccggctttttcttgag
cagcgcgatcttgtgaccacgcacttcatgccccggttccggtacatccttgttgacgag
ttccaggacacggacctgacgcagttcgatatcatcctctctattatcgggacgccgtcc
ccttccacggattgtctcttcattgtcggggatcccaaacagtcgatctatctcttccgc
gatgcagatgtgacccggttcaaggaggcacaggagatcatcaccaaggcatgcacggga
aggaagatcgatctcgataccagtttccggagcacgaaagaggtgatcggccttgcgaat
ttcctcttctcccggctccttgcatccgcagaaaaaccgtgggagttcgggtacgagccg
gtcagaatatccggaaaccgtgcggatcacaccggttccgttgaactcctcctgccgccg
aaaggaagcgatgctgccggcaccaaacggaacgaggctgcgatggttgcccggcggatc
cagtccgcgatccattcgcgaccccttacggtgtacgaggaacagccggaccattcgttt
gcccggcgcccggcccggtatggtgatatcgcgatcctgctcgaacagcggaccaacctc
ccgcaatacatttccgcgctgggcgagtacggcattcccttctatgtccacggggggacc
gggttttaccaccggcaggaagtgtacgatcttacgaacatcctctcgttccttgaatac
cggcatgacaatgtcagccttgccggcattctccggtccccatacttcggcctgccggat
acggaacttttccacattgcgcaggagaacggccggacgctctgggacaaactcgggaag
tacgcgaggaggaccggccctgggccggcaacccgtgcccgcgatcttctcgcatcctgg
cagacatatgccggccggaccggcctggtctccctgctgcgccggattttgtcggagtcc
ggtgtttacacggtctatgcagcgctcccggccggcgaacagatccttgccaacatcgag
aaactggttgccatggcccgggccagagaggaggccgggaattattcgcttgccgacttc
acgacggatctccggctcgcgatggaggatgacgaacgggaaggcgaggcccatctcgat
gcccttgccgagaatgctgtcaacatcatgaccgtgcatgcggcaaaggggctggagttc
cccattgtcttcgtgccggacatgggcatgagcttcccgaacactacttcgccgatcctg
atcggcgacaacccgctgatggtgggcgtgaaggtcccgaatccccgggagaatttcgag
atgaccgagagtccggtcttccttgcattgcgcgagcagcagaagcagaaggagcgggcc
gaacggaagcgtctgctgtacgttgccctcacccgggcccgcgaccatctcatcatgagc
gggaccatgccggaggattccgggttgtcgtacgatctttcccggtcccggatcgaatgg
atcttcacggcgtttggcgtgaccggggatgccatcgcgaccggcgggcttgatctcgaa
ctgccggacgggaccggatcgatcaggttatcgatcgtctccgattccgattcgatcccg
gccgaaatcgggcgggtggaaccggaactgattattgtgccgaaggaatgtgcggggatg
tgcgggagctggcagccaccggagtacaaggtagggaagcgacggatccggccggtgtcg
gtttccgaactggagaaggcagaaacaaaaatcccggaacctcatgaaaaagtcgcatca
aagtacctgccgggggtcgaaggcgcaaagaagggaacgatcatccacgaagtgctccgg
ggccgggatgctgcgacggttttgcgcgagtatggcgagtactcggaggagcatgtccgg
cagtgtgaggagatcctgtcggcgtttctcaattctgatttgatgaagcgggtgaagcgg
tcgtattgcgaggtgccgtttgttgtgacggttgatggcgggccggttaccgggaagatc
gaccggttgtgtgagatggaggatggatcgtgggttgtgatcgattataagtcagaaaca
tctgccgattatgcagcggttgcggaggggtatgctttttcgattgcggtttatgtggag
gctgcctgtcagatcatacgaggaacggtaacggcggtagtacattttacggagttgggg
atgttttggaagaggtaa
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