Methanoregula formicica: Metfor_2278
Help
Entry
Metfor_2278 CDS
T02392
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfo
Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_2278
Enzymes [BR:
mfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Metfor_2278
Transfer RNA biogenesis [BR:
mfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metfor_2278
Prokaryotic type
Metfor_2278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGB03283
UniProt:
L0HJ04
LinkDB
All DBs
Position
2246768..2248042
Genome browser
AA seq
424 aa
AA seq
DB search
MRESTFPLERELGMRWYASDGDGIGGRLRSSPSDFIVEEIPIEGKGGTAGPYLICRLTKT
NWELQHAVREIAKRLGISHRRIGWAGTKDRNAITTQWISIYDVTEEQVRGVQLKDIVLEP
LRNANEALALGQLEGNRFALVIRDTDPNDLAGRVEAITGTVREAVPNFFGLQRFGAIRPV
THAVGEWILRDNYEQAVLTYIGLPFPSENEDVRAVRTAFLETRDPAPALRNLPVQMNYER
AMLQHLHNNPGDYAGALRELPPKLLSMFVSAFQSYIFNCALSRRFDDGVALTEPVPGDHL
VFANGRTDTVTATNAAAAALHIRRGRCSIALFMPGRGNSSGPVLKEPVMDGLLAEKNITP
DDFARASRFVGTKFEGAFRPISLKTEIEYSTGETDVTLKFTLPPGHYATTVCREYMKADP
VRMV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagagagagcaccttccccctcgaacgcgagctcgggatgcgctggtatgccagcgat
ggcgacgggatcggcggcaggctccgctccagtccctcggactttatcgtggaggagatc
ccgatcgagggaaagggcggcactgcaggcccatacctcatctgccggctgaccaagacc
aactgggaactccagcacgcggtcagggagatcgcaaaacggctcgggatcagccaccgc
cggatcgggtgggccggtaccaaggaccggaacgcgataacaacacaatggatctcgatc
tatgacgttaccgaagaacaggtgcggggcgtgcagctcaaagacattgtccttgaaccg
ctgcggaatgccaacgaggccctcgccctcggccagctggaagggaaccggtttgcgctg
gtgatccgggacaccgatccgaatgaccttgccgggcgggtagaggcgataaccgggact
gtccgcgaagctgtccccaactttttcggactccagcgtttcggcgcgatccgcccggtc
acccacgcggtcggcgaatggatattgcgggacaactacgagcaggcggtcctcacgtac
atcggcctcccgttcccttctgagaacgaagacgtccgggccgtccgcaccgcgtttctc
gaaacccgcgacccggcaccggcgctccgcaaccttcccgtccagatgaattacgaacgg
gccatgctccagcatctccacaataacccgggcgactatgccggggccctccgcgagctc
ccgcccaagctcctctccatgttcgtctctgcattccagtcgtacatcttcaactgtgcc
ctgagccggaggttcgacgacggggtcgcactcacggaaccggtgccgggcgaccacctg
gtctttgccaatggccggacagatacggtaaccgccacaaacgccgcggccgccgccctc
catatccggcgcggccggtgcagcatcgccctcttcatgcccggtcgcggaaacagcagc
ggcccggttcttaaggaaccggtcatggacggacttcttgcggagaagaatatcacgccg
gatgactttgcccgggcctcgcgctttgtcggcacgaagtttgagggggcgttccgcccc
atctcgctcaaaacagagattgagtattccaccggggagacggacgtgacgctgaagttc
acgctcccgcccggccattacgcgacaacggtctgccgcgagtacatgaaagctgatccc
gtgcggatggtctaa
DBGET
integrated database retrieval system
