Methanoregula formicica: Metfor_2512
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Entry
Metfor_2512 CDS
T02392
Name
(GenBank) translation elongation factor EF-1 alpha
KO
K03231
elongation factor 1-alpha
Organism
mfo
Methanoregula formicica
Pathway
mfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Metfor_2512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfo03019
]
Metfor_2512
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_2512
03012 Translation factors [BR:
mfo03012
]
Metfor_2512
04131 Membrane trafficking [BR:
mfo04131
]
Metfor_2512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfo04147
]
Metfor_2512
Messenger RNA biogenesis [BR:
mfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Metfor_2512
Transfer RNA biogenesis [BR:
mfo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Metfor_2512
Translation factors [BR:
mfo03012
]
Eukaryotic type
Elongation factors
Metfor_2512
Membrane trafficking [BR:
mfo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Metfor_2512
Exosome [BR:
mfo04147
]
Exosomal proteins
Proteins found in most exosomes
Metfor_2512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Tsr1_G-like
RsgA_GTPase
DUF5511
Motif
Other DBs
NCBI-ProteinID:
AGB03506
UniProt:
L0HI97
LinkDB
All DBs
Position
2458997..2460274
Genome browser
AA seq
425 aa
AA seq
DB search
MASDKPHMNLAVIGHIDHGKSTTVGRMMFETGAVPAHIIEGYRKEAETKGKATFEFAWVM
DNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPD
GVMEQTKEHVFLSRTLGITQIIIAVNKMDAVKYDEKRFNEVKKDLSDLIKMVGYKPEETL
FIPISSLQGVNFKANSPETPWYKGPALIPALDTFKEPDKPTDKPFRLPIQDVYSISGIGT
VPVGRVETGIMKKGMKVSFMPANKDGEIKSIEMHHEEIPQALPGDNVGFNVRGIGKGDIR
RGDVCGPVEAPPTVADEFTAQIVVLQHPSALTVGYTPVFHCHTTQTACTFIELKKKLDPR
SGQTKEENPTFLKSGDAAIVVIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQ
PKQMR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgacaaacctcacatgaatctggccgttatcggccacatcgaccacggaaag
tcaaccaccgtcggacggatgatgttcgagaccggcgctgtaccggcccacatcattgaa
gggtaccgcaaggaggctgagaccaagggtaaggcaacctttgagtttgcatgggttatg
gacaacctcaaggaagagcgtgagagaggtatcaccatcgatatcgctcacaagaggttc
gacacccccaagtactacttcaccgttgtggactgccccgggcacagggacttcgtcaag
aacatgatcaccggtgcatctcaggctgatgcagcagttctcgttgtcgcagctcctgat
ggtgtcatggagcagaccaaggagcacgttttcctctcaagaacccttggcattacccag
atcatcatcgccgtcaacaagatggacgctgtcaagtacgacgagaagcggttcaacgaa
gtcaagaaggatctctccgatctcatcaagatggtcggttacaagcccgaagaaaccctt
ttcatcccgatcagttccctgcagggcgtaaacttcaaagccaacagccccgagactccc
tggtacaagggcccggcactcattccggcactcgacaccttcaaggagcccgacaaaccg
accgacaagcccttccggctcccgatccaggatgtgtacagcatcagcggtatcggcact
gttccggtcggccgcgttgagaccggtatcatgaagaagggaatgaaggtcagcttcatg
cccgccaacaaggatggggaaatcaagtccatcgagatgcatcacgaagagatcccgcag
gcactccctggcgacaacgtagggttcaacgtccgcggtatcggcaagggcgacatccgc
cgcggcgatgtttgcggccctgttgaagcacccccgaccgttgcagatgaattcactgca
cagatcgtcgtgctccagcacccgagcgcactgaccgtcggttacactccggtcttccac
tgccacaccacccagacagcctgcacattcatcgagctcaagaagaaactcgacccccgc
tccggccagaccaaggaagagaacccgaccttcctcaaatccggtgacgcagccattgtc
gtcatcaagcccacaaagccgatggtcattgagaacgtcaaggaactcccgcagctcggc
aggttcgccgtccgcgatatgggttcaacgatcgccgccggtatgtgcatcgcaatccag
ccaaaacagatgagataa
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