Methanoregula formicica: Metfor_2613
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Entry
Metfor_2613 CDS
T02392
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mfo
Methanoregula formicica
Pathway
mfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Metfor_2613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfo03400
]
Metfor_2613
Enzymes [BR:
mfo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Metfor_2613
DNA repair and recombination proteins [BR:
mfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Metfor_2613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGB03605
UniProt:
L0HHV0
LinkDB
All DBs
Position
2556289..2556891
Genome browser
AA seq
200 aa
AA seq
DB search
MKTFRYGRTEIAHLKKRDKKLGAAIDEIGMIERDVTPDLFTALVVGVASQQISAKAAETV
WRRMEEKLGTITPSSIAGATPEEIQQCGMSMRKAGYIKGIGDAVTNGSLDLAGLRDLSDD
DVIARLSALNGVGVWTAEMLLIFSMERPDVLSWGDLAIRRGMMHLYGKSTIDRAAFERYR
KRYSPYGSVASLYLWEISHR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttccgatatggcaggaccgagattgcccacctgaaaaagcgggataagaaa
ttgggagccgccatcgatgagatcgggatgattgaacgggacgtgacacccgacctgttc
acggcccttgtcgtaggcgtggcaagccagcagatctcggcaaaggctgctgaaactgtc
tggcgccggatggaggagaaacttggaacgatcaccccgtcgtccattgccggtgccact
cctgaggagatccaacagtgcggcatgtcaatgagaaaagcgggttacatcaagggaatc
ggggatgccgtgaccaatggcagcctcgaccttgccgggctccgtgatctttccgatgac
gatgttattgcccgcctctcggccctgaacggcgtaggggtctggactgccgaaatgctc
ctcatcttctccatggaacggccggacgtcctgagctggggagacctggcgatacgcagg
gggatgatgcacctgtacggaaagagtaccatcgaccgtgcagcattcgaacggtaccgg
aaacggtattccccttatggatccgtggcatcgctgtacctgtgggagatctcgcaccgg
taa
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integrated database retrieval system
