Methanoregula formicica: Metfor_2674
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Entry
Metfor_2674 CDS
T02392
Name
(GenBank) rRNA pseudouridine synthase, putative
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfo
Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_2674
Enzymes [BR:
mfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Metfor_2674
Transfer RNA biogenesis [BR:
mfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metfor_2674
Prokaryotic type
Metfor_2674
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AGB03664
UniProt:
L0HKU8
LinkDB
All DBs
Position
2603039..2604121
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AA seq
360 aa
AA seq
DB search
MDVPHSREDSEAVHLWNRAGIIVIDKPRGPSSHEVAAWVGKMLGCQVGHSGTLDPQVSGV
LLIMLGNAARLAPLLLQHDKEYICLMRLHGDVDRERIDKRAEEFTGRLYQRPPRKSAVKR
NLRIREVHKLEILDVDGRLVLFRVHCDAGTYIRSLCHHMGFVLGVGAHMVELRRTRSGTF
SESSMYTLHDVQDAAVAAREGDRSALEKMIVSVDAAVPELPIVVVRDAAIDALCHGASLA
GVGVVSTMEFAKDQTVAVLSGKKEFICLGRALVPSGSFRPGDTGLVIAPTTVFMQPGTYP
RSWKKSDKVYPSKAEKKAKQKAAKPKSPRPAGKTEKPTGKKSFGRPARRPDDRGRKKRYH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcccccactcacgggaggactcggaggcggtccatctctggaacagggccggc
atcatcgttatcgacaagccccgcggcccctcaagtcacgaagtcgctgcatgggtgggg
aagatgctggggtgccaggtgggtcattccggtacactcgacccgcaggtctccggcgtg
ctgctcatcatgctcggcaatgctgcccgactcgccccgctcctgctccagcatgacaag
gaatatatctgcctgatgcggttgcacggggatgtggaccgggagcgaatcgataaacgt
gcagaggagttcaccggccgtctctaccagcgaccgccccggaagagcgctgtgaagcgg
aacctccgcatccgcgaggtccacaaactggagatcctcgacgtggacgggcggctcgtc
ctcttccgggtgcactgcgatgccggtacctacatccgctcgctctgtcaccacatgggg
ttcgtactgggcgttggtgcccacatggtggagctgcgccggacccgctcgggcactttc
tcagaatcgtcgatgtataccctgcacgatgtgcaggacgcagctgttgcggcacgggag
ggagaccgatccgcgttggagaagatgattgtatctgttgacgctgccgtccccgagctg
ccaatcgtggttgtccgcgatgcggcaatagacgcgctctgccatggcgcctcgcttgcc
ggcgtgggcgtggtcagcaccatggagtttgccaaggatcagaccgttgccgtgctctcg
gggaagaaagagttcatctgcctcgggagagcgcttgtcccgtctggttctttcaggccc
ggcgataccgggcttgtcatcgcgccgaccacggtcttcatgcagccgggcacctatccc
cgcagctggaaaaaatctgacaaggtctacccctcgaaggcagagaaaaaggcaaaacaa
aaagcggcaaagccgaagtccccgcgtcccgcaggaaaaacggagaagcctaccggtaag
aagtcattcggaagacccgcccggagaccggacgaccggggcaggaagaagagataccat
taa
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