Marinomonas foliarum: JSY38_01230
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Entry
JSY38_01230 CDS
T07165
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_01230
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JSY38_01230
Archaeal homologous recombinant proteins
JSY38_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
CREPT
MMR_HSR1
AAA_22
GTP_EFTU
TRPM_tetra
DUF87
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QRV24191
LinkDB
All DBs
Position
complement(251268..254996)
Genome browser
AA seq
1242 aa
AA seq
DB search
MKICKLRLKNLNSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR
LKVSPSQNDVMTRHTSECLAEVEFEIKGKGYRAFWGQRRARGQSDGKLQPMTCELCERDG
TIITTKINEKIDKIADITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTEIY
GDVSKWVFDKHKLEKQTIASLEKFNEQTQLLSDDAFAELKQTESSFESNEKANADALKQH
QAVLEWRRTEKKLQEQVAEYQQQFDDAMQALADFAPQQRQLEQALTAQVLQPDYDKQQGL
KSRLDQNQADVSQYSEMQQAQLKQSQVLTDSVEQAKEKLARTRADLEALNNKINDEIQPI
FSRQESVKAQHQDSLARLKQATEKVDNQQAQLKDVTEKLTGIDKACDESKAILSRWTSPE
KIENQLASWQHQAQIIEANTQAIAELEISIDQGSKSYDAARSAHGSNQAKLEHEQASIEE
RQQALQSTVHDYMALSSQREYADWQKGYHQTERAQYNAQSLWKQFHQYQDQQLQLSELDE
NLNTMASRIQQQQSQLEQQRQTYKNKLRHQKSIEKLAEAERHIVALTHLRNELGEHDDCP
LCGSAEHNLANALYQADSGSQEEFLLLGKELDSLKGQGMQLAADLESMQRELTSGQTRRQ
QLIDGLLTTENDLKEWLTSLNQGQGFNLSDKEQVSALVQHVEQDWLALQDIAPKLEALHQ
SRLALEAELQNLVVQHQTSQQQVSKDLNQCQLLWQTLEAHQKNLASKKDEQEKITANLRH
DMQQASVPDSYFDLSLVDALTQLQEAMKQWRDSKAGYDALLQQREQLGYESKNLENTLKE
SQQLRDDAQAKVNELDASLADITKQLYSLLGDKSVGELRQEAQSLADHAYQELEKIEAER
QQLAQALASSKASLEALNKTRLVLAEEYDAALAHWQKSLAEKGFEDEAAWLQASLSTEEM
TQRQTTLKHLQEAVAKLQTLLNQSEESLAKHIERKSEFVALEGKESGNAEFDAISLEALE
EKYTQLDAERQTLHRQWGVISQQIQEETQRREQVAKSKEALEARREAFIHLERLNHLIGS
ADGAKFRRFAQSLTLDHLVYLANQHLEILHRRYQLMRNEDALSLLVVDTWQANASRDTKT
LSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLESALDALDNLHSSGKT
IGIISHISALKERIPVQIKLTKQSGLGVSRLGAEFAVHAVEE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgcaaactgcgcctgaagaatttgaattccctaaagggcgaatgggaaatt
gattttaccaaagcgccatttgacgacgctggtgtgtttgccattgtcgggccgacgggc
gcgggtaagtcgaccttgttggatgcgatttgtttggctttgtatcacgaaacaccgcgc
ctgaaagtatcaccaagtcagaacgatgtgatgacgcgtcatacgtcggaatgtttggcg
gaagtcgagtttgaaataaaaggcaaaggttatcgcgctttctgggggcagcggcgagct
cgaggtcagagcgatggtaagttgcagccgatgacgtgtgagctttgcgagcgtgacggc
accatcattaccaccaagataaatgaaaaaatcgataagatagccgacatcactggtttg
gatttttcgcgttttaccaagtctatgttgctggctcaaggtggcttttcggcgtttttg
aatgcgtcagccaatgacagggctgagttattagaagagctaaccggtacagaaatttac
ggtgatgtgtcgaagtgggtgtttgataaacacaagcttgagaagcaaaccatagcgtcg
cttgagaagtttaatgagcagactcagttattatcagatgacgcttttgctgagctaaag
cagaccgagtcgagttttgagtcaaatgaaaaagccaatgcagacgcgttaaagcaacat
caagcggtattggagtggagacgtactgagaagaaactgcaagagcaagtggctgaatat
cagcaacaattcgatgatgcaatgcaggcgttagcggattttgcacctcagcaacgacag
cttgagcaagcactcacggcgcaggttttacagccagattatgacaaacagcaaggttta
aaatcacgtttggatcagaaccaggcggatgttagtcaatactctgaaatgcaacaagca
cagcttaagcaaagccaggtattgactgattccgttgagcaagcgaaagaaaagttagcc
cgtacgcgagcagatttggaggccttgaataacaagatcaatgatgaaattcagccgatc
ttttcccgtcaagagagtgtgaaggctcagcatcaggatagccttgctcgacttaaacaa
gcgacagaaaaagtcgataatcagcaggcgcaactaaaagacgtgactgagaagctaacg
ggtattgataaagcctgtgacgaaagcaaagccattttaagccgctggacatcgccagaa
aaaattgaaaatcagttggccagttggcagcatcaggcacaaatcatagaggcaaatacc
caagctattgctgaacttgagatcagtatcgatcaaggttccaaaagttatgatgctgct
cgctctgctcatggaagcaatcaagctaagttagagcatgaacaagccagcatagaagag
cgtcagcaagcattgcagagcacggttcatgattacatggcgttatcatcgcagcgtgaa
tatgccgattggcagaaaggttatcatcaaactgaacgtgctcagtataatgcgcaatca
ctctggaaacagtttcatcaatatcaagatcaacagttgcaattgtccgagctggacgag
aatctgaatacaatggcaagccgtattcagcaacagcaaagccagctagagcaacaaagg
caaacctacaaaaacaagcttcgtcatcaaaaatcgattgaaaaacttgccgaggcggag
cgtcatattgtggcgttaacccatttgcgtaatgagttaggtgaacatgatgattgtccg
ttgtgtggttcagcagagcacaatcttgctaatgctttgtaccaagcagattctggtagc
caagaagagtttcttctattgggcaaagaattagacagtctgaaaggccagggtatgcag
ttggcggcagacttggaatccatgcagcgtgaattaacatctggtcaaacgcgacgtcag
caattgatcgatggcttactgacaaccgaaaatgatctgaaagaatggctgacgtcgttg
aatcagggtcaaggttttaacttgtctgataaagaacaagtctctgctcttgttcaacat
gttgagcaagattggcttgcgctgcaagacatagcacctaaacttgaagccttgcatcag
tctcgtttggctttagaggccgagttgcagaacctagttgttcagcaccaaacaagtcag
cagcaggtttcgaaagatctgaatcaatgtcaattattgtggcaaaccttagaggctcat
caaaagaatctcgctagtaagaaggatgagcaagaaaaaatcactgcaaatttacgccat
gatatgcagcaagcgagtgtgccggacagctattttgatttgtctttggttgatgcgttg
acccagttacaagaggcgatgaagcaatggcgcgacagcaaagccggttacgatgctttg
ttgcagcagcgtgagcagcttggttatgaaagtaaaaatttagaaaatacgttaaaagag
agtcagcaactacgcgatgatgcgcaagccaaagtgaatgagttagatgcgagcttagct
gatattactaaacagctgtatagcttgttaggtgataagagtgttggcgaacttcgtcaa
gaagcgcaatctttggctgatcatgcttatcaagagctggagaaaattgaagcggagcgg
cagcagcttgctcaagctttggcgtccagcaaggcgtcgcttgaagcacttaataagact
cgtctagttttggcagaagaatatgatgcagcgcttgcacattggcaaaagtccctagcc
gagaaaggttttgaggatgaagctgcttggctgcaagcaagcttatccacagaagaaatg
acgcagcgccaaacgactcttaagcatcttcaggaagctgttgctaagctgcaaactttg
cttaaccaatcggaagaatctttggctaagcatattgaaagaaagtctgagtttgttgct
cttgaaggcaaagaatctggtaatgcggagtttgacgctatttcccttgaggcactagaa
gaaaaatacactcagctcgatgcagagcgccaaactctacatcgtcaatggggcgttatt
agtcaacagattcaagaagaaacacagcgaagggaacaagtggcgaaatctaaggaggca
ctagaggcgcgtcgagaggctttcatacatctggagcgtttgaatcatctgattggttcg
gcagatggtgccaagttccgtcgctttgcgcaaagtttaactttggatcatttagtctat
ttggctaatcagcatttggagattttgcatcgtcgttatcaattaatgcgtaacgaagat
gctttgtctttgcttgtggtggatacttggcaagcaaatgcctcgcgagatactaagacg
ctgtctggcggtgaatctttcttagtaagtttggcattggcattggcattatctgatttg
gtttcccataaaaccagtattgattctttgttcttggatgaaggctttggcaccttggat
agtgagacactggagtctgctcttgatgccttggataatttgcattcttccggtaagacc
attggtatcatcagccatattagcgctctaaaagagcgtattccggtacaaatcaaactc
acaaaacaaagtggtttaggcgtcagtcgtcttggagctgaatttgcggttcatgcggtt
gaggagtaa
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integrated database retrieval system
