Marinomonas foliarum: JSY38_01235
Help
Entry
JSY38_01235 CDS
T07165
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_01235 (sbcD)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JSY38_01235 (sbcD)
Archaeal homologous recombinant proteins
JSY38_01235 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
DUF6875
Motif
Other DBs
NCBI-ProteinID:
QRV24192
LinkDB
All DBs
Position
complement(254993..256270)
Genome browser
AA seq
425 aa
AA seq
DB search
MKILHTSDWHLGQHFMGKSRREEHKAFIYWLLALVDSESIDAVIIAGDVFDTGSPPSYAR
EMYHQLVLDMKARQCQLVIVAGNHDSVSMLNESKSLLTYLDTQVSSQANLEDIDSHVIPL
KDKTGDIAAWVCAVPYLRPKDVMQSVAGQSEQDKKLGLLQMIGDFYQQVFEASCEKNKAL
KAPVPIIGTGHLTAVGGQVSESVRDLYVGTLEALPTSVFPAFDYLALGHIHRAQPISKSG
RFRYSGSPIPLSFDELGRDKTVVIFDTSLLGEDTFVDDLFAEPTDPVQLITIPNFQPMAS
LKGSLKEVIKQISALELTEEKMLWLEVTVIADEYLSDVHKRLLEVIDGKPIELLRVMRRS
AVEKKNEGFEARKTLSELTVGDVFEQSLKSNLELDEDESKTLIELFNTCLVELEEHQQEG
EVKQS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacacacttctgactggcatctcggtcagcattttatgggaaaatcccgc
cgtgaagagcacaaagcctttatctattggttattggcgctggtggacagtgaatccatc
gatgcggtgattattgcgggtgatgtgtttgatacaggctcgccgccaagctatgcgcgg
gaaatgtatcatcagttagtattagacatgaaggctcgtcaatgccagttggtgatcgtc
gcgggaaatcacgattcggtcagtatgctaaacgaatccaagagcttgttgacctatctc
gatactcaagtgtcgagccaagctaacctagaagatatcgattctcatgttattccgcta
aaagacaaaacgggtgatattgccgcctgggtatgtgctgtgccgtatttacgcccgaaa
gacgtaatgcaaagcgtcgctgggcaatctgaacaagataagaagctcggtttgctgcaa
atgattggtgatttttaccagcaagtgttcgaagcctcgtgtgaaaaaaacaaagcactg
aaagcaccggtgccgattattggtactgggcatttaaccgcagtgggtgggcaagtaagc
gagtcggtgcgtgatctttatgtaggaacattggaagccttgccgacatctgtgtttccg
gcgtttgattatcttgcccttgggcatattcatcgtgctcaaccgatcagtaaaagcggt
cggttccgttacagcggctcgccgattccgttgagctttgatgagttgggacgtgacaaa
accgtggtgatcttcgatacctctttgctaggtgaagatacctttgtggacgacttgttt
gctgagccaacggatcctgtgcaattaatcacgattcctaattttcagcctatggcgagt
ttgaagggcagcttgaaagaggtgattaaacagatttcagcgttagaattgactgaagaa
aaaatgctttggttagaagtgacggtgattgccgacgagtatttaagtgatgtgcataag
cgcttgttagaagtcattgacggcaaaccgattgagttactacgagtgatgcgccgcagt
gcggtagagaaaaagaacgaaggctttgaagcgcgcaaaaccttgtcggaattaacggtt
ggtgatgtgtttgagcagagtcttaaatccaatttagaactggatgaagacgagtctaaa
actctgatcgagctttttaatacttgcttggtggagctggaagagcatcaacaagaaggc
gaggtgaagcaatcatga
DBGET
integrated database retrieval system
